RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MASP2O00187 686 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 NKX2-8O15522 239 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 PGM3O95394 542 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 H6PDO95479 791 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 ITGAMP11215 1152 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 NCK1P16333 377 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 NR0B1P51843 470 aaKnown RBP13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 AQP4P55087 323 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 HPCAP84074 193 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 FAM98BQ52LJ0 330 aaKnown RBP13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 GPAT3Q53EU6 434 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 ATP1A1-AS1Q5TC04 95 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 CCDC80Q76M96 950 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 BBS10Q8TAM1 723 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 FIG4Q92562 907 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 SLC38A1Q9H2H9 487 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 RUBCNLQ9H714 662 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 POLE3Q9NRF9 147 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 MYOTQ9UBF9 498 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 DSPPQ9NZW4 1301 aa13.52□□□□□ -0.25
SMPDL3B-201ENST00000373888 A0A0G2JPF8 293 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 HNRNPCL2B2RXH8 293 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 HNRNPCL3B7ZW38 293 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 EFSO43281 561 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 STX11O75558 287 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 GCM2O75603 506 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 ZIC2O95409 532 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 HNRNPCL4P0DMR1 293 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 CDC20Q12834 499 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 AIMP2Q13155 320 aaKnown RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 DECR1Q16698 335 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 CRB2Q5IJ48 1285 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 CCNJQ5T5M9 372 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 TCTN3Q6NUS6 607 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 H3F3CQ6NXT2 135 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 JMJD6Q6NYC1 403 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 FRRS1Q6ZNA5 592 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 SLC34A3Q8N130 599 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 BCORP1Q8N888 145 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 THAP3Q8WTV1 239 aaPredicted RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 SAP130Q9H0E3 1048 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 ETAA1Q9NY74 926 aa13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 MRTO4Q9UKD2 239 aaKnown RBP13.51□□□□□ -0.25
SMPDL3B-201ENST00000373888 DENRO43583 198 aaKnown RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 FCMRO60667 390 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 TIPRLO75663 272 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 NADKO95544 446 aaPredicted RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 IL33O95760 270 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 IGKV1D-16P01601 117 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 RAP2AP10114 183 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 PRKAR1AP10644 381 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 ETS2P15036 469 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 KDELR2P33947 212 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 EIF2S3P41091 472 aaKnown RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 RRADP55042 308 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 NRG3P56975 720 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 CHRNEQ04844 493 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 CHRNB3Q05901 458 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 BLMHQ13867 455 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 RPS26P11Q5JNZ5 115 aaPredicted RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 TYW3Q6IPR3 259 aaKnown RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 FIGNL1Q6PIW4 674 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 OLIG3Q7RTU3 272 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 TAGAPQ8N103 731 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 SLC15A4Q8N697 577 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 CLEC1AQ8NC01 280 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 PMM1Q92871 262 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 LMF1Q96S06 567 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 G6PC3Q9BUM1 346 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 MAGIXQ9H6Y5 334 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 LIN28AQ9H9Z2 209 aaKnown RBP13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 OLAHQ9NV23 265 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 FBXO34Q9NWN3 711 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 WDR45Q9Y484 360 aa13.5□□□□□ -0.25
SMPDL3B-201ENST00000373888 WWP2O00308 870 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 KIAA0513O60268 411 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 PDE9AO76083 593 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 LDLRP01130 860 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 ABCD3P28288 659 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 AQP1P29972 269 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 CRYBA2P53672 197 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 PSMD4P55036 377 aaKnown RBP13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 PLCXD2Q0VAA5 305 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 ATP6AP1Q15904 470 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 PPP4R4Q6NUP7 873 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 ZAR1Q86SH2 424 aa13.49□□□□□ -0.25
SMPDL3B-201ENST00000373888 SPACA3Q8IXA5 215 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms