RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ZNF649Q9BS31 505 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 NT5DC2Q9H857 520 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 AHSPQ9NZD4 102 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 PPIEQ9UNP9 301 aaKnown RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 IRGMA1A4Y4 181 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.35
USP49-201ENST00000373006 ELFN1P0C7U0 828 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 GSTM3P21266 225 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 TBXA2RP21731 343 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 AHCYP23526 432 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 GIFP27352 417 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 BSGP35613 385 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 BTG1P62324 171 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 SREBF2Q12772 1141 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 FZD5Q13467 585 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 LASP1Q14847 261 aaKnown RBP12.83□□□□□ -0.35
USP49-201ENST00000373006 ZNF750Q32MQ0 723 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 MPP7Q5T2T1 576 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 LYPD4Q6UWN0 246 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 SIRT6Q8N6T7 355 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 POGLUT1Q8NBL1 392 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 OR5M3Q8NGP4 307 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 CHFRQ96EP1 664 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 LMLNQ96KR4 655 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 PRRC1Q96M27 445 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 ZFP3Q96NJ6 502 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 OR51J1Q9H342 316 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 OSGEPL1Q9H4B0 414 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 RANBP3Q9H6Z4 567 aaPredicted RBP12.83□□□□□ -0.35
USP49-201ENST00000373006 CYSLTR2Q9NS75 346 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 SPG21Q9NZD8 308 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 TAC3Q9UHF0 121 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 ASF1AQ9Y294 204 aa12.83□□□□□ -0.35
USP49-201ENST00000373006 OLFM2O95897 454 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 CTSLP07711 333 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ANXA3P12429 323 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP49-201ENST00000373006 AHRP35869 848 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 PITPNBP48739 271 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 MAP2K6P52564 334 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 EXOSC2Q13868 293 aaKnown RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 LGALSLQ3ZCW2 172 aaPredicted RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 OR5AR1Q8NGP9 310 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 KLHL1Q9NR64 748 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 SEMA4GQ9NTN9 838 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 LIPT1Q9Y234 373 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 A0A1W2PRG6 482 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 H7BY64 318 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 LGALS8O00214 317 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 LEFTY2O00292 366 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 EFCAB14O75071 495 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 MPC2O95563 127 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 TPOP07202 933 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 KELP23276 732 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 PSMB5P28074 263 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 STXBP1P61764 594 aaKnown RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 AADACL4Q5VUY2 407 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 CPOQ8IVL8 374 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ZNF689Q96CS4 500 aaPredicted RBP12.83□□□□□ -0.36
USP49-201ENST00000373006 SCMH1Q96GD3 660 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 C16orf58Q96GQ5 468 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 PRAP1Q96NZ9 151 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 MED20Q9H944 212 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 ATPIF1Q9UII2 106 aa12.83□□□□□ -0.36
USP49-201ENST00000373006 KIAA0100Q14667 2235 aaKnown RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 CHST10O43529 356 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 RNF13O43567 381 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 TCRBP04435 133 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 VSX2P58304 361 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 RAB14P61106 215 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 TPGS2Q68CL5 300 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 LUZP2Q86TE4 346 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 NKAIN4Q8IVV8 208 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 KRT78Q8N1N4 520 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 RFKQ969G6 155 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 MACROD1Q9BQ69 325 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 LHX9Q9NQ69 397 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 NKIRAS2Q9NYR9 191 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 H2AFY2Q9P0M6 372 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 C8orf89P0DMQ9 161 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 TRHRP34981 398 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 TMEM215Q68D42 235 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms