RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 NGFRP08138 427 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 HK1P19367 917 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 TACR1P25103 407 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 SERPINB4P48594 390 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 PRIM2P49643 509 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 VSNL1P62760 191 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 DAZAP2Q15038 168 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-201ENST00000372235 GALNTL6Q49A17 601 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 ATP6AP1LQ52LC2 224 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 OR5M10Q6IEU7 315 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 POMZP3Q6PJE2 187 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 P4HA3Q7Z4N8 544 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 ZZZ3Q8IYH5 903 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 C9orf106Q8NAJ2 232 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 NUP43Q8NFH3 380 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 OR2M3Q8NG83 312 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 OR6Y1Q8NGX8 325 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 OR2W6PQ8NHA6 318 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 TCP10LQ8TDR4 215 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 HOXB13Q92826 284 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-201ENST00000372235 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
TMEM53-201ENST00000372235 TSSK3Q96PN8 268 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 G6PC3Q9BUM1 346 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 DSN1Q9H410 356 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 CRIM1Q9NZV1 1036 aa17.12■□□□□ 0.33
TMEM53-201ENST00000372235 LRBAP50851 2863 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 EMC8O43402 210 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 NKX2-2O95096 273 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 EPXP11678 715 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 HPGDP15428 266 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 POU3F2P20265 443 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 PCYT1AP49585 367 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 CLDN18P56856 261 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 RPS3AP61247 264 aaKnown RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 MAD2L1Q13257 205 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 PRSS53Q2L4Q9 553 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 RAET1LQ5VY80 246 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 ZNF551Q7Z340 670 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 MISPQ8IVT2 679 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 OR2T11Q8NH01 316 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 ZIM3Q96PE6 472 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 TMEM109Q9BVC6 243 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 CLEC4MQ9H2X3 399 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 TUBB1Q9H4B7 451 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 RASSF1Q9NS23 344 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 GIN1Q9NXP7 522 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 CLCF1Q9UBD9 225 aa17.11■□□□□ 0.33
TMEM53-201ENST00000372235 RPH3AQ9Y2J0 694 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-201ENST00000372235 FBN2P35556 2912 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 A0A087WZY1 265 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 IGLV3-32A0A0A0MS00 114 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 FAM221AA4D161 298 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 A6NNC1 897 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 AKAP10O43572 662 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 HCRTR2O43614 444 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 NME6O75414 186 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 TNFRSF21O75509 655 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 SLU7O95391 586 aaKnown RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 UTS2O95399 124 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 KRT16P08779 473 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 ALOX5P09917 674 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 BCKDHAP12694 445 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 CPA2P48052 419 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 RFX3P48380 749 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 PRKAG1P54619 331 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 WNT3P56703 355 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 LSM12Q3MHD2 195 aaKnown RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 UGT3A2Q3SY77 523 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 FBXW10Q5XX13 1052 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 SZRD1Q7Z422 152 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 PPP1R14CQ8TAE6 165 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 AENQ8WTP8 325 aaKnown RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 DUSP19Q8WTR2 217 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 SLC9A6Q92581 669 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 C1GALT1C1Q96EU7 318 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 RMND5BQ96G75 393 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 RBM24Q9BX46 236 aaKnown RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 EQTNQ9NQ60 294 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 PAQR5Q9NXK6 330 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-201ENST00000372235 ATP6V1HQ9UI12 483 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 PACSIN3Q9UKS6 424 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 PTGDR2Q9Y5Y4 395 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 AP4B1Q9Y6B7 739 aa17.1■□□□□ 0.33
TMEM53-201ENST00000372235 KDM4EB2RXH2 506 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-201ENST00000372235 PIP5K1BO14986 540 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 ANGPTL1O95841 491 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 TUBBP07437 444 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 CHRNGP07510 517 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 FCGR2AP12318 317 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 MAP3K8P41279 467 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 STARP49675 285 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 TESK1Q15569 626 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 BHLHB9Q6PI77 547 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 CROCCP2Q86T23 111 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 MREGQ8N565 214 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 CIDECQ96AQ7 238 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-201ENST00000372235 MOAP1Q96BY2 351 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 INTS12Q96CB8 462 aaKnown RBP17.09■□□□□ 0.33
TMEM53-201ENST00000372235 DACH2Q96NX9 599 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms