RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PNPLA2Q96AD5 504 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 SCMH1Q96GD3 660 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 G6PC3Q9BUM1 346 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 SH2D2AQ9NP31 389 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 KLRF1Q9NZS2 232 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CNIH4Q9P003 139 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
TPM3-211ENST00000368531 MKLN1Q9UL63 735 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 CORO2BQ9UQ03 480 aa12.75□□□□□ -0.37
TPM3-211ENST00000368531 PINLYPA6NC86 204 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 PRAMEF25A6NGN4 478 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 KLRC4-KLRK1H3BQV0 150 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 FCMRO60667 390 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 STX11O75558 287 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 H6PDO95479 791 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 NPPAP01160 153 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 EVI2BP34910 448 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 CASP3P42574 277 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 MEOX1P50221 254 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 KCNJ2P63252 427 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 HPCAP84074 193 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 FADDQ13158 208 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.74□□□□□ -0.37
TPM3-211ENST00000368531 FLYWCH1Q4VC44 716 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 RPS26P11Q5JNZ5 115 aaPredicted RBP12.74□□□□□ -0.37
TPM3-211ENST00000368531 GCNT6Q5T4J0 391 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 FAM91A1Q658Y4 838 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 FBXW8Q8N3Y1 598 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
TPM3-211ENST00000368531 ZNF614Q8N883 585 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 Q8NA96 180 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 GATSQ8NAP1 163 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 OR2M7Q8NG81 312 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 OR4C3Q8NH37 302 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 OR10A6Q8NH74 314 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 FBXO27Q8NI29 283 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 GRHL3Q8TE85 626 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 ECSITQ9BQ95 431 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 DOHHQ9BU89 302 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 OSBPL11Q9BXB4 747 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 PROK2Q9HC23 129 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 GALNT9Q9HCQ5 603 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
TPM3-211ENST00000368531 P2RX2Q9UBL9 471 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
TPM3-211ENST00000368531 NCKAP5O14513 1909 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 TMEM247A6NEH6 219 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 TNFRSF21O75509 655 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 UBOX5O94941 541 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 RASAL1O95294 804 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 OXSR1O95747 527 aaPredicted RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 AK1P00568 194 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 CHRM4P08173 479 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 HPGDP15428 266 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 PTGDSP41222 190 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 MAGEA8P43361 318 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 MASP1P48740 699 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 TXNL4AP83876 142 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 CHRNEQ04844 493 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 INPP5JQ15735 1006 aaPredicted RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 MARCH3Q86UD3 253 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 IFNEQ86WN2 208 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 FAM98AQ8NCA5 519 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 LSM14AQ8ND56 463 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 NFKBIDQ8NI38 313 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 SLC38A5Q8WUX1 472 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 SECISBP2Q96T21 854 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 SH3GL1Q99961 368 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 FAM173AQ9BQD7 235 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 ANGPTL4Q9BY76 406 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 QRSL1Q9H0R6 528 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 TUBA8Q9NY65 449 aaPredicted RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 USP22Q9UPT9 525 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 LIPT1Q9Y234 373 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
TPM3-211ENST00000368531 ZZEF1O43149 2961 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
TPM3-211ENST00000368531 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
TPM3-211ENST00000368531 TTLL8A6PVC2 850 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 C17orf51A8MQB3 221 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 B2RBV5 119 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 SCDO00767 359 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 GNB5O14775 395 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 GMFGO60234 142 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 FADS1O60427 444 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 TFPTP0C1Z6 253 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 TBXA2RP21731 343 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 SLC6A2P23975 617 aa12.72□□□□□ -0.37
TPM3-211ENST00000368531 DCTP40126 519 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms