RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FADS6Q8N9I5 356 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 SLC16A11Q8NCK7 471 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 OR5P2Q8WZ92 322 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 ABTB1Q969K4 478 aaPredicted RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 DOCK7Q96N67 2140 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 PAIP2Q9BPZ3 127 aaKnown RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 CXorf36Q9H7Y0 433 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 FAM120CQ9NX05 1096 aaKnown RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 ABCA12Q86UK0 2595 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 SCO2O43819 266 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 ZIC3O60481 467 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 SNNO75324 88 aaPredicted RBP17.21■□□□□ 0.35
CKS1B-203ENST00000368439 UTS2O95399 124 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 ACTL6AO96019 429 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 IGFBP2P18065 325 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 VPS26BQ4G0F5 336 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 ZCCHC12Q6PEW1 402 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 PM20D2Q8IYS1 436 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 OR2M3Q8NG83 312 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 OR10Q1Q8NGQ4 319 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 OR14L1PQ8NHC6 308 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 FBXO30Q8TB52 745 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 GPR151Q8TDV0 419 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.35
CKS1B-203ENST00000368439 NUF2Q9BZD4 464 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 BHLHE41Q9C0J9 482 aaPredicted RBP17.21■□□□□ 0.35
CKS1B-203ENST00000368439 MEAF6Q9HAF1 191 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 NPDC1Q9NQX5 325 aaPredicted RBP17.21■□□□□ 0.35
CKS1B-203ENST00000368439 ATAD3AQ9NVI7 634 aa17.21■□□□□ 0.35
CKS1B-203ENST00000368439 MRTO4Q9UKD2 239 aaKnown RBP17.21■□□□□ 0.35
CKS1B-203ENST00000368439 LRBAP50851 2863 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 FAM90A27PA6NNH2 459 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 ANKRD28O15084 1053 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 KCNH1O95259 989 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 C6orf47O95873 294 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 HMGN2P05204 90 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 SNRPB2P08579 225 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 COX6B1P14854 86 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 CPN1P15169 458 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 CEACAM8P31997 349 aaPredicted RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 ZFP36L2P47974 494 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 PSMD4P55036 377 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 WNT3P56703 355 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 B3GALT5-AS1P59052 145 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 PRR5P85299 388 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 CASP8Q14790 479 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 GRAMD1BQ3KR37 738 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 ZAR1Q86SH2 424 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 MARCH3Q86UD3 253 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 MCEMP1Q8IX19 187 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 KIRREL3Q8IZU9 778 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 ZNF295-AS1Q8N0V1 137 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 NAXEQ8NCW5 288 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 MGARPQ8TDB4 240 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 SLC9A6Q92581 669 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 PRPF18Q99633 342 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 SPOCK3Q9BQ16 436 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 DUSP26Q9BV47 211 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 TRIM8Q9BZR9 551 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 ZCCHC3Q9NUD5 404 aaKnown RBP17.2■□□□□ 0.34
CKS1B-203ENST00000368439 FBXO34Q9NWN3 711 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 TAS2R10Q9NYW0 307 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 PPP4R1LQ9P1A2 415 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 CAMK2AQ9UQM7 478 aa17.2■□□□□ 0.34
CKS1B-203ENST00000368439 CSMD1Q96PZ7 3565 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 KCNK2O95069 426 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 DPP4P27487 766 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 RFX3P48380 749 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.19■□□□□ 0.34
CKS1B-203ENST00000368439 NSUN5P2Q63ZY6 315 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 POMZP3Q6PJE2 187 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 SZRD1Q7Z422 152 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 GALNT10Q86SR1 603 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 IFNEQ86WN2 208 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 TNIP2Q8NFZ5 429 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 OTUB1Q96FW1 271 aaPredicted RBP17.19■□□□□ 0.34
CKS1B-203ENST00000368439 YIPF4Q9BSR8 244 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 DSN1Q9H410 356 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 KCNJ16Q9NPI9 418 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 GPATCH2Q9NW75 528 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 GIN1Q9NXP7 522 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 MED11Q9P086 117 aa17.19■□□□□ 0.34
CKS1B-203ENST00000368439 IGLV3-32A0A0A0MS00 114 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 SDHDO14521 159 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 SCN2BO60939 215 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 NGFRP08138 427 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 ALOX5P09917 674 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 MSX1P28360 303 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 TIMP3P35625 211 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 CCT3P49368 545 aaKnown RBP17.18■□□□□ 0.34
CKS1B-203ENST00000368439 PRIM2P49643 509 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 STARP49675 285 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 LHX2P50458 406 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 DSCR4P56555 118 aaPredicted RBP17.18■□□□□ 0.34
CKS1B-203ENST00000368439 HBA1P69905 142 aa17.18■□□□□ 0.34
CKS1B-203ENST00000368439 LASP1Q14847 261 aaKnown RBP17.18■□□□□ 0.34
CKS1B-203ENST00000368439 LSM12Q3MHD2 195 aaKnown RBP17.18■□□□□ 0.34
CKS1B-203ENST00000368439 OGFOD2Q6N063 350 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms