RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 UBL4AP11441 157 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PSMB10P40306 273 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 RPS5P46782 204 aaKnown RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ERVK-25P63136 954 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TUBA3CQ13748 450 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 FAM189A2Q15884 450 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PIGGQ5H8A4 983 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 GAREM2Q75VX8 874 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ASRGL1Q7L266 308 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 Q8N402 240 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ACBD7Q8N6N7 88 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 GPR150Q8NGU9 434 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 MFSD8Q8NHS3 518 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PPP1R14BQ96C90 147 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 RIMS3Q9UJD0 308 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 OXSR1O95747 527 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SFRP4Q6FHJ7 346 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SLC35F2Q8IXU6 374 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 OR2A12Q8NGT7 310 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 COQ8AQ8NI60 647 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TBC1D15Q8TC07 691 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TRMT2BQ96GJ1 504 aaKnown RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 DNTTIP1Q9H147 329 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PCDH17O14917 1159 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ACTA2P62736 377 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ACTG2P63267 376 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CHRNEQ04844 493 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 RPE65Q16518 533 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 OR2S2Q9NQN1 319 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 FKBP14Q9NWM8 211 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 MYH10P35580 1976 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 KIF13AQ9H1H9 1805 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SULT2B1O00204 365 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SLC1A7O00341 560 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SYT7O43581 403 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 EIF2S3P41091 472 aaKnown RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 NFATC4Q14934 902 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 MLC1Q15049 377 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ALKAL1Q6UXT8 129 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CFAP77Q6ZQR2 320 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CPOQ8IVL8 374 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 OR5AK2Q8NH90 309 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 ARRDC2Q8TBH0 407 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 KCNN1Q92952 543 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TM7SF3Q9NS93 570 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CAMK2AQ9UQM7 478 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PCDHGB6Q9Y5F9 930 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TVP23AA6NH52 213 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TNFSF12O43508 249 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 EDN3P14138 238 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 POU3F2P20265 443 aaPredicted RBP12.16□□□□□ -0.46
PTPRK-207ENST00000368226 NCS1P62166 190 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 MAB21L1Q13394 359 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 KIR2DS3Q14952 304 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 CD300LFQ8TDQ1 290 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 PRSS16Q9NQE7 514 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 TMEM14AQ9Y6G1 99 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
PTPRK-207ENST00000368226 MEIS3P1A6NDR6 274 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 J3KTA2 159 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 HPRP00739 348 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 HRGP04196 525 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 FUT1P19526 365 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ISG20Q96AZ6 181 aaKnown RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 SORT1Q99523 831 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 NUDT21O43809 227 aaKnown RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ENDOUP21128 410 aaKnown RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 CST5P28325 142 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 LCN1P31025 176 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 STT3AP46977 705 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 POU4F2Q12837 409 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 SERTAD2Q14140 314 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 MICAQ29983 383 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ELMOD2Q8IZ81 293 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 SGCZQ96LD1 299 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 URM1Q9BTM9 101 aaKnown RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 MAGIXQ9H6Y5 334 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 HSPB11Q9Y547 144 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 OTOL1A6NHN0 477 aaPredicted RBP12.15□□□□□ -0.46
PTPRK-207ENST00000368226 WDPCPO95876 746 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ANXA3P12429 323 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 TUBG1P23258 451 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 NR4A2P43354 598 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 FXYD4P59646 89 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ENTPD2Q9Y5L3 495 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
PTPRK-207ENST00000368226 ATXN1LP0C7T5 689 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms