RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 NPTX1Q15818 432 aa8.78□□□□□ -1
VTA1-201ENST00000367621 IFI44LQ53G44 452 aa8.78□□□□□ -1
VTA1-201ENST00000367621 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
VTA1-201ENST00000367621 FIGNL1Q6PIW4 674 aa8.78□□□□□ -1
VTA1-201ENST00000367621 DHRS4L2Q6PKH6 230 aa8.78□□□□□ -1
VTA1-201ENST00000367621 C6orf15Q6UXA7 325 aaPredicted RBP8.78□□□□□ -1
VTA1-201ENST00000367621 FKBP9P1Q75LS8 142 aa8.78□□□□□ -1
VTA1-201ENST00000367621 C16orf62Q7Z3J2 963 aa8.78□□□□□ -1
VTA1-201ENST00000367621 ZNF605Q86T29 641 aa8.78□□□□□ -1
VTA1-201ENST00000367621 TSPYL5Q86VY4 417 aaPredicted RBP8.78□□□□□ -1
VTA1-201ENST00000367621 VRK2Q86Y07 508 aa8.78□□□□□ -1
VTA1-201ENST00000367621 RBM45Q8IUH3 476 aaKnown RBP8.78□□□□□ -1
VTA1-201ENST00000367621 COX18Q8N8Q8 333 aa8.78□□□□□ -1
VTA1-201ENST00000367621 APCDD1LQ8NCL9 501 aa8.78□□□□□ -1
VTA1-201ENST00000367621 OR1N1Q8NGS0 311 aa8.78□□□□□ -1
VTA1-201ENST00000367621 WDR36Q8NI36 951 aaKnown RBP8.78□□□□□ -1
VTA1-201ENST00000367621 GPR151Q8TDV0 419 aa8.78□□□□□ -1
VTA1-201ENST00000367621 TMBIM1Q969X1 311 aa8.78□□□□□ -1
VTA1-201ENST00000367621 SLC46A1Q96NT5 459 aa8.78□□□□□ -1
VTA1-201ENST00000367621 LMF1Q96S06 567 aa8.78□□□□□ -1
VTA1-201ENST00000367621 BARD1Q99728 777 aaKnown RBP8.78□□□□□ -1
VTA1-201ENST00000367621 ARHGDIGQ99819 225 aa8.78□□□□□ -1
VTA1-201ENST00000367621 CIB1Q99828 191 aa8.78□□□□□ -1
VTA1-201ENST00000367621 TACO1Q9BSH4 297 aaKnown RBP8.78□□□□□ -1
VTA1-201ENST00000367621 SEMA4CQ9C0C4 833 aa8.78□□□□□ -1
VTA1-201ENST00000367621 OR8D2Q9GZM6 311 aa8.78□□□□□ -1
VTA1-201ENST00000367621 YY1AP1Q9H869 796 aa8.78□□□□□ -1
VTA1-201ENST00000367621 POLE3Q9NRF9 147 aa8.78□□□□□ -1
VTA1-201ENST00000367621 THSD1Q9NS62 852 aa8.78□□□□□ -1
VTA1-201ENST00000367621 CALML5Q9NZT1 146 aa8.78□□□□□ -1
VTA1-201ENST00000367621 PRODH2Q9UF12 536 aa8.78□□□□□ -1
VTA1-201ENST00000367621 CNOT11Q9UKZ1 510 aaKnown RBP8.78□□□□□ -1
VTA1-201ENST00000367621 MKLN1Q9UL63 735 aa8.78□□□□□ -1
VTA1-201ENST00000367621 OAZ3Q9UMX2 235 aa8.78□□□□□ -1
VTA1-201ENST00000367621 PCDHGB3Q9Y5G1 929 aa8.78□□□□□ -1
VTA1-201ENST00000367621 MAGED1Q9Y5V3 778 aaPredicted RBP8.78□□□□□ -1
VTA1-201ENST00000367621 CLCA3PQ9Y6N3 262 aa8.78□□□□□ -1
VTA1-201ENST00000367621 SEC16AO15027 2179 aa8.78□□□□□ -1
VTA1-201ENST00000367621 GVINP1Q7Z2Y8 2422 aa8.78□□□□□ -1
VTA1-201ENST00000367621 LOC102723996A0A087X1L8 192 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SYNDIG1LA6NDD5 238 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 AGAP5A6NIR3 686 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SAGE2PA6NJ88 616 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 TTC36A6NLP5 189 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 CLDN24A6NM45 220 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 J3KTA2 159 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PDLIM1O00151 329 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SYT5O00445 386 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PEX12O00623 359 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 TPST2O60704 377 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 BCAS1O75363 584 aaPredicted RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 STX11O75558 287 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SERPINB7O75635 380 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 UGT2B17O75795 530 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SOX30O94993 753 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 RASAL1O95294 804 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 AK1P00568 194 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 CST1P01037 141 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 KLK3P07288 261 aaPredicted RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 DRD5P21918 477 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PRKAR1BP31321 381 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PIGAP37287 484 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 DCTP40126 519 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 LIMS1P48059 325 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 EEF1A1P68104 462 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 TARDBPQ13148 414 aaKnown RBP eCLIP8.77□□□□□ -1.01
VTA1-201ENST00000367621 PCOLCEQ15113 449 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 EBPQ15125 230 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 NRF1Q16656 503 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 ANKRD34AQ69YU3 496 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 OR2T5Q6IEZ7 315 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 TCTN3Q6NUS6 607 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 IZUMO2Q6UXV1 221 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 CPEB2Q7Z5Q1 589 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 KRT73Q86Y46 540 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 HS3ST5Q8IZT8 346 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 ZNF619Q8N2I2 560 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 CLIP4Q8N3C7 705 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 CBR4Q8N4T8 237 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 BCORP1Q8N888 145 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 ICA1LQ8NDH6 482 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 OR4C15Q8NGM1 316 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 OR2Y1Q8NGV0 311 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 OR2T29Q8NH02 315 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 OR52P1PQ8NH57 321 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 SPPL2AQ8TCT8 520 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PHF10Q8WUB8 498 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 GEMIN6Q8WXD5 167 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 LZICQ8WZA0 190 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 DAZLQ92904 295 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 C8orf44Q96CB5 159 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 RMND5BQ96G75 393 aaPredicted RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 ZNF354BQ96LW1 612 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 ZNF300Q96RE9 604 aaPredicted RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 CRB3Q9BUF7 120 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 BDH2Q9BUT1 245 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 PINK1Q9BXM7 581 aa8.77□□□□□ -1.01
VTA1-201ENST00000367621 NXF5Q9H1B4 397 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 NXT1Q9UKK6 140 aaKnown RBP8.77□□□□□ -1.01
VTA1-201ENST00000367621 BAG5Q9UL15 447 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms