RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 NME6O75414 186 aaPredicted RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 TNFSF13O75888 250 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 FAM153BP0C7A2 387 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 FCGR2AP12318 317 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 CPA3P15088 417 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 TCEA1P23193 301 aaKnown RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 GPC1P35052 558 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 RPS3AP61247 264 aaKnown RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 OCRLQ01968 901 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 STX5Q13190 355 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 DEFB113Q30KQ7 82 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 FAM153CQ494X1 144 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 GLYR1Q49A26 553 aaPredicted RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 TDRPQ86YL5 185 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 UBQLNLQ8IYU4 475 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 CNEP1R1Q8N9A8 125 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 UBLCP1Q8WVY7 318 aaPredicted RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 GFM2Q969S9 779 aaKnown RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 ZBED6CLQ96FA7 236 aaPredicted RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 LMF2Q9BU23 707 aaKnown RBP13.41□□□□□ -0.26
CTSD-202ENST00000367196 TRMOQ9BU70 441 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
CTSD-202ENST00000367196 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 TNFRSF21O75509 655 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTSD-202ENST00000367196 ATE1O95260 518 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 FOSL1P15407 271 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 RFX3P48380 749 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 C17orf67Q0P5P2 114 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 HSPB3Q12988 150 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 RNF165Q6ZSG1 346 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 CEP70Q8NHQ1 597 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 CCT7Q99832 543 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 SLC39A3Q9BRY0 314 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 LRTM1Q9HBL6 345 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 NEUROD4Q9HD90 331 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 ELOVL5Q9NYP7 299 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 ZNF226Q9NYT6 803 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 MED11Q9P086 117 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 TMED5Q9Y3A6 229 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
CTSD-202ENST00000367196 UQCRHLA0A096LP55 91 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 H3BML4 177 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 AZIN1O14977 448 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 SEC14L5O43304 696 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 TGM6O95932 706 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 HRGP04196 525 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 PRPS2P11908 318 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 GABRA3P34903 492 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 PRR5P85299 388 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 KRTAP21-3Q3LHN1 58 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 DUSP19Q8WTR2 217 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.275e-8■■■■■ 65.3
CTSD-202ENST00000367196 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 MS4A4EQ96PG1 132 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 FAM111AQ96PZ2 611 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 PLEKHF2Q9H8W4 249 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
CTSD-202ENST00000367196 PAQR5Q9NXK6 330 aaPredicted RBP13.39□□□□□ -0.27
CTSD-202ENST00000367196 TESMINQ9Y4I5 508 aa13.39□□□□□ -0.27
CTSD-202ENST00000367196 HRNRQ86YZ3 2850 aaPredicted RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 A0A087WZY1 265 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 IGLV3-32A0A0A0MS00 114 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 OR2M5A3KFT3 312 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 EMC8O43402 210 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 TBX19O60806 448 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 UTS2O95399 124 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ANGPTL1O95841 491 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 HPGDP15428 266 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ZNF17P17021 662 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 KRT4P19013 534 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 LCN1P31025 176 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 CD79BP40259 229 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ASMTP46597 345 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 KCNJ5P48544 419 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 FOXD4Q12950 439 aaPredicted RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 KIAA0040Q15053 153 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 SH2D5Q6ZV89 423 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 SZRD1Q7Z422 152 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 R3HCC1LQ7Z5L2 792 aaKnown RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 MISPQ8IVT2 679 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 GSPT2Q8IYD1 628 aaKnown RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 STARD4Q96DR4 205 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 MTERF3Q96E29 417 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ZNF845Q96IR2 970 aaPredicted RBP13.38□□□□□ -0.27
CTSD-202ENST00000367196 MED18Q9BUE0 208 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 PINK1Q9BXM7 581 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 RNF122Q9H9V4 155 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
CTSD-202ENST00000367196 ZNF337Q9Y3M9 751 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms