RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	OR1E2	P47887	323 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	C17orf47	Q8NEP4	570 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	CENPN	Q96H22	339 aa	Predicted RBP	19.53	■□□□□ 0.72
CD55-205	ENST00000367067	ZNF354B	Q96LW1	612 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	PINK1	Q9BXM7	581 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	ZNF700	Q9H0M5	742 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	IFT52	Q9Y366	437 aa		19.53	■□□□□ 0.72
CD55-205	ENST00000367067	DCHS1	Q96JQ0	3298 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	TERT	O14746	1132 aa	Known RBP	19.52	■□□□□ 0.72
CD55-205	ENST00000367067	COX6A1	P12074	109 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	UQCRB	P14927	111 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	SSPN	Q14714	243 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	DECR1	Q16698	335 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	FLYWCH1	Q4VC44	716 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	IGF2-AS	Q6U949	168 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	KIRREL2	Q6UWL6	708 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	PIWIL3	Q7Z3Z3	882 aa	Known RBP	19.52	■□□□□ 0.72
CD55-205	ENST00000367067	ZAR1	Q86SH2	424 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	VRK2	Q86Y07	508 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	APOBEC4	Q8WW27	367 aa	Known RBP	19.52	■□□□□ 0.72
CD55-205	ENST00000367067	BDH2	Q9BUT1	245 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	NRSN2	Q9GZP1	204 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	ASCL3	Q9NQ33	180 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	DNAJB9	Q9UBS3	223 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	ABCG2	Q9UNQ0	655 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	ZNF232	Q9UNY5	417 aa		19.52	■□□□□ 0.72
CD55-205	ENST00000367067	TRBV11-1	A0A0K0K1C0	115 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	SOCS6	O14544	535 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	IL7R	P16871	459 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	RPS4Y1	P22090	263 aa	Known RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	NR0B1	P51843	470 aa	Known RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	KCNC4	Q03721	635 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	PUM1	Q14671	1186 aa	Known RBP eCLIP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	IQCC	Q4KMZ1	466 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	ZNF441	Q8N8Z8	693 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	OR11G2	Q8NGC1	345 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	OR8K3	Q8NH51	312 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	LMF1	Q96S06	567 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067		A0A1W2PQ72	361 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	CDC14C	A4D256	554 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	PRAMEF25	A6NGN4	478 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	ACOX3	O15254	700 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	DBI	P07108	87 aa	Known RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	THBS1	P07996	1170 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	F8A1	P23610	371 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	PRKAR1B	P31321	381 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	LARS2	Q15031	903 aa	Known RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	NACC2	Q96BF6	587 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	HSPBAP1	Q96EW2	488 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	THSD1	Q9NS62	852 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	KCNE5	Q9UJ90	142 aa		19.51	■□□□□ 0.71
CD55-205	ENST00000367067	MRTO4	Q9UKD2	239 aa	Known RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	ZNF443	Q9Y2A4	671 aa	Predicted RBP	19.51	■□□□□ 0.71
CD55-205	ENST00000367067	NPIPA5	A0A0B4J1W7	369 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	CENPVL1	A0A0U1RR11	272 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	LOC101059948	A0A1B0GTJ6	334 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NPIPA7	E9PJI5	369 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	PEX12	O00623	359 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	T	O15178	435 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	UGT2B17	O75795	530 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	LGI1	O95970	557 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	IFNW1	P05000	195 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NPIPA8	P0DM63	369 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	ZNF26	P17031	533 aa	Predicted RBP	19.5	■□□□□ 0.71
CD55-205	ENST00000367067	OTX2	P32243	289 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	MAPK14	Q16539	360 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	BTBD16	Q32M84	506 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	DHRS4L2	Q6PKH6	230 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NDUFAF7	Q7L592	441 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	PPP1R32	Q7Z5V6	425 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	COMTD1	Q86VU5	262 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	GALNT4	Q8N4A0	578 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NUBPL	Q8TB37	319 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NKD1	Q969G9	470 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	TP53INP1	Q96A56	240 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	EFHD2	Q96C19	240 aa	Predicted RBP	19.5	■□□□□ 0.71
CD55-205	ENST00000367067	VPS50	Q96JG6	964 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	IMMP1L	Q96LU5	166 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	COQ10B	Q9H8M1	238 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	NDUFAF4	Q9P032	175 aa		19.5	■□□□□ 0.71
CD55-205	ENST00000367067	DCDC2B	A2VCK2	349 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067		H0YJX3	145 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	SYT5	O00445	386 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	GNGT2	O14610	69 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	PRSS23	O95084	383 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	EPPIN	O95925	133 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	ITGA2	P17301	1181 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	HSPA13	P48723	471 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	PSMD4	P55036	377 aa	Known RBP	19.49	■□□□□ 0.71
CD55-205	ENST00000367067	PSPH	P78330	225 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	EXT1	Q16394	746 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	TSEN54	Q7Z6J9	526 aa	Known RBP	19.49	■□□□□ 0.71
CD55-205	ENST00000367067	CARM1	Q86X55	608 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	DTX1	Q86Y01	620 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	IL22RA1	Q8N6P7	574 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	TMBIM1	Q969X1	311 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	AMBRA1	Q9C0C7	1298 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	NTN4	Q9HB63	628 aa		19.49	■□□□□ 0.71
CD55-205	ENST00000367067	KCND3	Q9UK17	655 aa		19.49	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms