RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 LOC102723532A0A0G2JNH3 316 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 TMEM129A0AVI4 362 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 INMT-MINDY4F8WBC2 141 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SLC30A4O14863 429 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SLC28A2O43868 658 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 HPGDSO60760 199 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 NME6O75414 186 aaPredicted RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 RFPL3O75679 317 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SLC22A5O76082 557 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 PDGFAP04085 211 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 PTGER1P34995 402 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 GIPRP48546 466 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 EVX1P49640 407 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 CAV3P56539 151 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 WNT4P56705 351 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 IKZF1Q13422 519 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 TPBGQ13641 420 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 MLF2Q15773 248 aaPredicted RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 TMEM52BQ4KMG9 183 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 CRTC2Q53ET0 693 aaPredicted RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 SYT14P1Q58G82 188 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 FAM205BPQ63HN1 556 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SZRD1Q7Z422 152 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 GRAMD2AQ8IUY3 354 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 AMER3Q8N944 861 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SLC37A3Q8NCC5 494 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 BBS10Q8TAM1 723 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 FAM3CQ92520 227 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 NR4A3Q92570 626 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 DDX31Q9H8H2 851 aaKnown RBP13.79□□□□□ -0.2
PRKN-204ENST00000366896 SLC9A8Q9Y2E8 581 aa13.79□□□□□ -0.2
PRKN-204ENST00000366896 SNTNA6NMZ2 147 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 DRD2P14416 443 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PPP2R1BP30154 601 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 FGF9P31371 208 aaPredicted RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 CCR8P51685 355 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 GAS1P54826 345 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PER3P56645 1201 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 IL18Q14116 193 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PRAMEF8Q5VWM4 474 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PRAMEF7Q5VXH5 474 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PODNL1Q6PEZ8 512 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 TRILQ7L0X0 811 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 LRRC20Q8TCA0 184 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 RGMAQ96B86 450 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 CREB3L1Q96BA8 519 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PHF11Q9UIL8 331 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 GSTK1Q9Y2Q3 226 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 ATG2BQ96BY7 2078 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 LRRTM2O43300 516 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 LZTS3O60299 673 aaPredicted RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 OR12D1P0DN82 309 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 RAB40BQ12829 278 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 WASH2PQ6VEQ5 465 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 TMEM64Q6YI46 380 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 ZER1Q7Z7L7 766 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 MORN4Q8NDC4 146 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 OR5K2Q8NHB8 316 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 TFGQ92734 400 aaPredicted RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 COX14Q96I36 57 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 PRRC1Q96M27 445 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 GPA33Q99795 319 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 TM7SF3Q9NS93 570 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 MRPL39Q9NYK5 338 aaKnown RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
PRKN-204ENST00000366896 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
PRKN-204ENST00000366896 CKAP5Q14008 2032 aa13.77□□□□□ -0.2
PRKN-204ENST00000366896 CASC3O15234 703 aaKnown RBP13.77□□□□□ -0.21
PRKN-204ENST00000366896 PPM1DO15297 605 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 TSC22D2O75157 780 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 APOL3O95236 402 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 EPHX1P07099 455 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 NR2F6P10588 404 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 MMP11P24347 488 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 WASP42768 502 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 ANXA11P50995 505 aaKnown RBP13.77□□□□□ -0.21
PRKN-204ENST00000366896 SMSP52788 366 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 FABP5Q01469 135 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 TAGLNQ01995 201 aaKnown RBP13.77□□□□□ -0.21
PRKN-204ENST00000366896 GNA13Q14344 377 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 CD200R1LQ6Q8B3 271 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 TEX261Q6UWH6 196 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 ERN2Q76MJ5 926 aaKnown RBP13.77□□□□□ -0.21
PRKN-204ENST00000366896 ZNF582Q96NG8 517 aaPredicted RBP13.77□□□□□ -0.21
PRKN-204ENST00000366896 TM9SF2Q99805 663 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 ATF6BQ99941 703 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 FNDC11Q9BVV2 318 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 PRSS16Q9NQE7 514 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 CTPS2Q9NRF8 586 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 MAN2C1Q9NTJ4 1040 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 U3KQ87 197 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 ISM1B1AKI9 464 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 H7BY64 318 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 MAN2B1O00754 1011 aa13.77□□□□□ -0.21
PRKN-204ENST00000366896 FABP7O15540 132 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms