RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 EGFP01133 1207 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 ADH6P28332 368 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 MFSD13AQ14CX5 517 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 IRF4Q15306 451 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF791Q3KP31 576 aaPredicted RBP11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 UBE2NLQ5JXB2 153 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 PLBD1Q6P4A8 553 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCTD20Q7Z5Y7 419 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 TSNAXQ99598 290 aaKnown RBP11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLCO3A1Q9UIG8 710 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 NAALAD2Q9Y3Q0 740 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 PAK4O96013 591 aaPredicted RBP11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR7G1Q8NGA0 311 aa11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 UNKLQ9H9P5 680 aaKnown RBP11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 MRPS17Q9Y2R5 130 aaKnown RBP11.15□□□□□ -0.63
CDC42BPA-202ENST00000366764 CNOT1A5YKK6 2376 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 A0A0G2JMP0 313 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMIM30A4D0T7 59 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 PGAM2P15259 253 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 GNSP15586 552 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 DSC1Q08554 894 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TCEAL6Q6IPX3 200 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ENPP7Q6UWV6 458 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ENTHD1Q8IYW4 607 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR4M2Q8NGB6 313 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 CHD5Q8TDI0 1954 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM129A0AVI4 362 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 C8orf89P0DMQ9 161 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SCN8AQ9UQD0 1980 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 H3BUI4 141 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 C1orf105O95561 183 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 GABRA3P34903 492 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR5J2Q8NH18 312 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 THEM6Q8WUY1 208 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 DPCDQ9BVM2 203 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 EMC7Q9NPA0 242 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 CCND3P30281 292 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 POMZP3Q6PJE2 187 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMAP2Q8WU79 429 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 DTD2Q96FN9 168 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 CAPNS2Q96L46 248 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ATPIF1Q9UII2 106 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 PLAGL1Q9UM63 463 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 DDOSTP39656 456 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 HENMT1Q5T8I9 393 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBM23Q86U06 439 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 CMKLR1Q99788 373 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 NANSQ9NR45 359 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBM7Q9Y580 266 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF208O43345 1280 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC18B1Q6NT16 456 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TTC9BQ8N6N2 239 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 DOK1Q99704 481 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 RRAS2P62070 204 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ARF5P84085 180 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 TSPAN31Q12999 210 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 MYADMQ96S97 322 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLCO2B1O94956 709 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 UBL3O95164 117 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 UBL4AP11441 157 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 FPGSQ05932 587 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SNAPC3Q92966 411 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 XKR8Q9H6D3 395 aa11.14□□□□□ -0.63
CDC42BPA-202ENST00000366764 PCP4L1A6NKN8 68 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ADRB3P13945 408 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ACVR1BP36896 505 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 BTG1P62324 171 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PHOSPHO1Q8TCT1 267 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 SORCS1Q8WY21 1168 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 TUBB1Q9H4B7 451 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 BABAM2Q9NXR7 383 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR6C2Q9NZP2 312 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 CAPNS1P04632 268 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 GRK5P34947 590 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 TTC34A8MYJ7 566 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 F5H0A9 414 aaPredicted RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 DPM1O60762 260 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 MRPL3P09001 348 aaKnown RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 WDR92Q96MX6 357 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 B8ZZF3 427 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 P2RX6O15547 441 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 MEF2DQ14814 521 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 DEFB134Q4QY38 66 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCT2Q8NC54 265 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PXYLP1Q8TE99 480 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms