RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 UBQLN2Q9UHD9 624 aa12.86□□□□□ -0.35
SGMS1-202ENST00000361781 ANXA2P2A6NMY6 339 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 SCN2BO60939 215 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 NTN1O95631 604 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ANXA2P07355 339 aaKnown RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 FBXO45P0C2W1 286 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ACP2P11117 423 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 PTPN2P17706 415 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.354e-6■□□□□ 10.2
SGMS1-202ENST00000361781 GMFBP60983 142 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RAB40BQ12829 278 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 SLITRK4Q8IW52 837 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 GJD3Q8N144 294 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RERGQ96A58 199 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 CACNG2Q9Y698 323 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 SCN3AQ9NY46 2000 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 TRBV2A0A0J9YWF9 115 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ANTXRLA6NF34 631 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 PLPP1O14494 284 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 SLC19A2O60779 497 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ZNF3P17036 446 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 SRFBP1Q8NEF9 429 aaKnown RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 ZFPM2Q8WW38 1151 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 TRMT61AQ96FX7 289 aaKnown RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 GPN1Q9HCN4 374 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 FZD3Q9NPG1 666 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 MED31Q9Y3C7 131 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 NAALAD2Q9Y3Q0 740 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 BACE2Q9Y5Z0 518 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 A0A0B4J203 849 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 MEIS3P1A6NDR6 274 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RGS9O75916 674 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 FGF18O76093 207 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 UBXN7O94888 489 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RAB3BP20337 219 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 CMPK1P30085 196 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 OR4C11Q6IEV9 310 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 HDDC3Q8N4P3 179 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 C12orf76Q8N812 135 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 BBS1Q8NFJ9 593 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 TMEM163Q8TC26 289 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 RANBP3Q9H6Z4 567 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-202ENST00000361781 PHF11Q9UIL8 331 aa12.85□□□□□ -0.35
SGMS1-202ENST00000361781 MGAMO43451 1857 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 TRAV27A0A087WT01 109 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ARPC5O15511 151 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 RAD1O60671 282 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 TRIM23P36406 574 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 GPR50Q13585 617 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.354e-6■■□□□ 12.3
SGMS1-202ENST00000361781 FAM71E1Q6IPT2 247 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 CPA6Q8N4T0 437 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 LINC00471Q8N535 108 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ZNF676Q8N7Q3 588 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 SLC41A3Q96GZ6 507 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 RETREG1Q9H6L5 497 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 METTL17Q9H7H0 456 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 FBXL3Q9UKT7 428 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 DUXAA6NLW8 204 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 PPM1AP35813 382 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 GZMMP51124 257 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 BTN1A1Q13410 526 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 LTB4RQ15722 352 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 CST9Q5W186 159 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 LIN54Q6MZP7 749 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 NKAIN4Q8IVV8 208 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 PRSS58Q8IYP2 241 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 OR52E2Q8NGJ4 325 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ADAMTS19Q8TE59 1207 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 GCDHQ92947 438 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 MAP6Q96JE9 813 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 PLA2G12AQ9BZM1 189 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 SLC27A6Q9Y2P4 619 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 A0A087WUU8 490 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 RCBTB2O95199 551 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ADH5P11766 374 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ELK1P19419 428 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ACTR1BP42025 376 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 KCNJ5P48544 419 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ACTR1AP61163 376 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 PITPNAQ00169 270 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 ACSM3Q53FZ2 586 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 C18orf63Q68DL7 685 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms