RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 DIP2BQ9P265 1576 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CBY3A6NI87 242 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PNPP00491 289 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LMO2P25791 158 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ACVRL1P37023 503 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PSEN2P49810 448 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 DAOAP59103 153 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RPS13P62277 151 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF91Q05481 1191 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GPR17Q13304 367 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FBXL22Q6P050 247 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SMIM15Q7Z3B0 74 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF527Q8NB42 609 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR52E4Q8NGH9 312 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MBOAT4Q96T53 435 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MCHR1Q99705 422 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 A0A1W2PS29 197 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CCR6P51684 374 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SNRPGP62308 76 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CYCSP99999 105 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RASGEF1BQ0VAM2 473 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CTF1Q16619 201 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR2G6Q5TZ20 316 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CHRDL2Q6WN34 429 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HIST2H3AQ71DI3 136 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 C2orf73Q8N5S3 287 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 BEND7Q8N7W2 519 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM163Q8TC26 289 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SLC25A36Q96CQ1 311 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PRRT1Q99946 306 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 AGRNO00468 2067 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 AGAP14A8MT82 685 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HTR6P50406 440 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 P2RY14Q15391 338 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FNDC3BQ53EP0 1204 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SOHLH1Q5JUK2 328 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ADGRG3Q86Y34 549 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SLC30A7Q8NEW0 376 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PMM1Q92871 262 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PTPN18Q99952 460 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 AK6Q9Y3D8 172 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PCDHGA2Q9Y5H1 932 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CAV3P56539 151 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MLLT1Q03111 559 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RAB40BQ12829 278 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 C9orf152Q5JTZ5 239 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CLLU1Q5K131 121 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TPGS1Q6ZTW0 290 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PRSS42Q7Z5A4 293 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CNTN4Q8IWV2 1026 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 KIAA1958Q8N8K9 716 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PLD4Q96BZ4 506 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR5M11Q96RB7 305 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 P2RX7Q99572 595 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CYB5R1Q9UHQ9 305 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MRPS33Q9Y291 106 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FCF1Q9Y324 198 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PCDHGC4Q9Y5F7 938 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TRAV18A0A075B6X5 111 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CD1EP15812 388 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GRK6P43250 576 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ISCA2Q86U28 154 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR5H2Q8NGV7 314 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CERKQ8TCT0 537 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MED18Q9BUE0 208 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HS3ST4Q9Y661 456 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 IRAK2O43187 625 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 STBD1O95210 358 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 POP4O95707 220 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 NSG1P42857 185 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CDONQ4KMG0 1287 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 KDELC1Q6UW63 502 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RD3Q7Z3Z2 195 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TTLQ8NG68 377 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR4E2Q8NGC2 313 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SMPDL3AQ92484 453 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 UHRF1Q96T88 793 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SMIM3Q9BZL3 60 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 SMOC2Q9H3U7 446 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GABRPO00591 440 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 DNAJB6O75190 326 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR8U9P0C7N5 309 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CBSLP0DN79 551 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CBSP35520 551 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HTR3AP46098 478 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZXDBP98169 803 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 RBMS2Q15434 407 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 NUP54Q7Z3B4 507 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 C12orf40Q86WS4 652 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LIX1LQ8IVB5 337 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CFAP52Q8N1V2 620 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FNDC9Q8TBE3 224 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ANKRD36A6QL64 1941 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ASGR1P07306 291 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GJA1P17302 382 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ELK1P19419 428 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 S1PR1P21453 382 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 KCNJ5P48544 419 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 MFSD13AQ14CX5 517 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms