RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ETV6P41212 452 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SLC26A5P58743 744 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TCTE1Q5JU00 501 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 CMKLR1Q99788 373 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 MICU1Q9BPX6 476 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ABI3Q9P2A4 366 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GLOD5A6NK44 160 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ANHXE9PGG2 379 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 AHSA1O95433 338 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FAM163BP0C2L3 166 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 GNRHRP30968 328 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 OR52N2Q8NGI0 321 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FNDC9Q8TBE3 224 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TAAR8Q969N4 342 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SLC25A44Q96H78 314 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 F5P12259 2224 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SMLR1H3BR10 107 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 IFNGR1P15260 489 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PRKCAP17252 672 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RIDAP52758 137 aaKnown RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ARHGAP1Q07960 439 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ASAH1Q13510 395 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PAN3Q58A45 887 aaKnown RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 KCNIP4Q6PIL6 250 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 C6orf120Q7Z4R8 191 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PNPLA2Q96AD5 504 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 C12orf42Q96LP6 360 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 C11orf54Q9H0W9 315 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 SYNPO2LQ9H987 977 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ICKQ9UPZ9 632 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RNF215Q9Y6U7 377 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF850A8MQ14 1090 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 PPP1R2P9O14990 202 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 FZD7O75084 574 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TAS2R19P59542 299 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 RAB4BP61018 213 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 NKPD1Q17RQ9 610 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 LYPD4Q6UWN0 246 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 LRP10Q7Z4F1 713 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 P4HA3Q7Z4N8 544 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 BORCS8Q96FH0 119 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 MINDY3Q9H8M7 445 aa8.32□□□□□ -1.08
COL6A6-201ENST00000358511 TTLL8A6PVC2 850 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM150CB9EJG8 249 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 NRP1O14786 923 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 PTBP1P26599 531 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 HLA-DMAP28067 261 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 IRF4Q15306 451 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 FAM205BPQ63HN1 556 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC18B1Q6NT16 456 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 LRRTM4Q86VH4 590 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OR51A7Q8NH64 312 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ST8SIA4Q92187 359 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 NINJ1Q92982 152 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF300Q96RE9 604 aaPredicted RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 HERPUD2Q9BSE4 406 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CNTNAP3Q9BZ76 1288 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SERINC1Q9NRX5 453 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RAB40ALP0C0E4 278 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 VIPR1P32241 457 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 FAM182AQ5T1J6 154 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 KIAA1324Q6UXG2 1013 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GDPD4Q6W3E5 623 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CCDC71LQ8N9Z2 235 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RAB40AQ8WXH6 277 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GJA5P36382 358 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 LRRC32Q14392 662 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC29A4Q7RTT9 530 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 HUS1BQ8NHY5 278 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OVCA2Q8WZ82 227 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 IL36AQ9UHA7 158 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 WASF3Q9UPY6 502 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CEP290O15078 2479 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 KDELR3O43731 214 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 DIRAS3O95661 229 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 MAGEB1P43366 347 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 LETMD1Q6P1Q0 360 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CDCA5Q96FF9 252 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF559Q9BR84 538 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 AK6Q9Y3D8 172 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 COL14A1Q05707 1796 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 A6NL46 340 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC38A8A6NNN8 435 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RNASET2O00584 256 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ANKRD28O15084 1053 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CPNE6O95741 557 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 DHCR24Q15392 516 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 LRIT3Q3SXY7 679 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CPZQ66K79 652 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 HOXB13Q92826 284 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms