RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LGI1O95970 557 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GIFP27352 417 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GABRA5P31644 462 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 JAG1P78504 1218 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 TDGQ13569 410 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 MEP1AQ16819 746 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ARL13AQ5H913 290 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 AGAP7PQ5VUJ5 663 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 AADACL3Q5VUY0 350 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 AGAP6Q5VW22 663 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 LCLAT1Q6UWP7 414 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ENPP6Q6UWR7 440 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 FBXL16Q8N461 479 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ADIPOR1Q96A54 375 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 MOAP1Q96BY2 351 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 AGAP4Q96P64 663 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 LRRC19Q9H756 370 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 H0YAE9 185 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SEMA4FO95754 770 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 KDELR2P33947 212 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 THBS3P49746 956 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 KCNJ11Q14654 390 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 CATSPEREQ5SY80 951 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GOLGA7Q7Z5G4 137 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ZNF679Q8IYX0 411 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GRPEL2Q8TAA5 225 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 NELL2Q99435 816 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 UBQLN2Q9UHD9 624 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 LTN1O94822 1766 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ALOX15BO15296 676 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 EFSO43281 561 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 LEFTY1O75610 366 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SC5DO75845 299 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 BPGMP07738 259 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ATP6AP1Q15904 470 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 HSD17B13Q7Z5P4 300 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 FAM217AQ8IXS0 508 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 HSD17B11Q8NBQ5 300 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 OR10AD1Q8NGE0 317 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 C15orf40Q8WUR7 153 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 TRMT2BQ96GJ1 504 aaKnown RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 TMEM209Q96SK2 561 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 CTRCQ99895 268 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ACBD6Q9BR61 282 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 MINDY3Q9H8M7 445 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SFXN1Q9H9B4 322 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ACKR4Q9NPB9 350 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GNG12Q9UBI6 72 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SSUH2Q9Y2M2 353 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 CDH10Q9Y6N8 788 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ATRNL1Q5VV63 1379 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 KIAA0513O60268 411 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 FMO6PO60774 539 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 RNASE1P07998 156 aaKnown RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 STSP08842 583 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 TCN2P20062 427 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 HOXA11P31270 313 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 KCNQ1P51787 676 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GPR85P60893 370 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 FUT2Q10981 343 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 GPRC6AQ5T6X5 926 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SFRP4Q6FHJ7 346 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SHFQ7M4L6 423 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SKA3Q8IX90 412 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ASB11Q8WXH4 323 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 AKR1E2Q96JD6 320 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 MAF1Q9H063 256 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 KCNK12Q9HB15 430 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SHISA7A6NL88 538 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ESR1P03372 595 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 HBQ1P09105 142 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 SMIM17P0DL12 118 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ART1P52961 327 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 IKZF1Q13422 519 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 HERC3Q15034 1050 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 STRADAQ7RTN6 431 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 OR2M7Q8NG81 312 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 OR4K13Q8NH42 304 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 CENPNQ96H22 339 aaPredicted RBP9.26□□□□□ -0.93
CHD3-202ENST00000358181 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 BTBD2Q9BX70 525 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 STEAP1Q9UHE8 339 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 NME7Q9Y5B8 376 aa9.26□□□□□ -0.93
CHD3-202ENST00000358181 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 NCBP2LA6PVI3 153 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 RPS26P62854 115 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 FAM69AQ5T7M9 428 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PAQR3Q6TCH7 311 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 DBX2Q6ZNG2 339 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 WFDC8Q8IUA0 241 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 DRAXINQ8NBI3 349 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 PSMF1Q92530 271 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 FOXJ1Q92949 421 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms