RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 SPRY4Q9C004 299 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 COPS7AQ9UBW8 275 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 GPN3Q9UHW5 284 aaPredicted RBP15.79■□□□□ 0.12
TPM1-205ENST00000357980 ACAD8Q9UKU7 415 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 CBLCQ9ULV8 474 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 LRCH1Q9Y2L9 728 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 TESMINQ9Y4I5 508 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 PCDHGA3Q9Y5H0 932 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 ZFHX2Q9C0A1 2572 aaPredicted RBP15.79■□□□□ 0.12
TPM1-205ENST00000357980 SDK2Q58EX2 2172 aa15.79■□□□□ 0.12
TPM1-205ENST00000357980 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
TPM1-205ENST00000357980 NPIPA5A0A0B4J1W7 369 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 FRG2CA6NGY1 282 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 C9orf172C9J069 976 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 NPIPA7E9PJI5 369 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 PEX12O00623 359 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 UGT2B17O75795 530 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 DBIP07108 87 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 NPIPA8P0DM63 369 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 NID1P14543 1247 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 UQCRBP14927 111 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 ALDH3A2P51648 485 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 EEF1A1P68104 462 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 DAG1Q14118 895 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 LARS2Q15031 903 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 FLYWCH1Q4VC44 716 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 ZNF836Q6ZNA1 936 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 CLIP4Q8N3C7 705 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 BCORP1Q8N888 145 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 OR4C15Q8NGM1 316 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 OR6T1Q8NGN1 323 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 SDCCAG3Q96C92 435 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 OSBPL10Q9BXB5 764 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 SEMA4CQ9C0C4 833 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 GABARAPL1Q9H0R8 117 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 NXF5Q9H1B4 397 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 TRIM45Q9H8W5 580 aaPredicted RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 USE1Q9NZ43 259 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 RAB26Q9ULW5 256 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 OR10H1Q9Y4A9 318 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 KNTC1P50748 2209 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 CLDN24A6NM45 220 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 OR6C76A6NM76 312 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 NPIPB9F8W1W9 429 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 HPRP00739 348 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 UMODP07911 640 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 IL7RP16871 459 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 DRD5P21918 477 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 FUT4P22083 530 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 LIMS1P48059 325 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 SPIBQ01892 262 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 NPTX1Q15818 432 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.78■□□□□ 0.12
TPM1-205ENST00000357980 NHSL2Q5HYW2 709 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 FAM69BQ5VUD6 431 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 CPEB2Q7Z5Q1 589 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 APCDD1LQ8NCL9 501 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 B3GNT7Q8NFL0 401 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 MAGEE2Q8TD90 523 aaPredicted RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 LCORQ96JN0 433 aaPredicted RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 DHRS1Q96LJ7 313 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 G6PC3Q9BUM1 346 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 ACER3Q9NUN7 267 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 RLIMQ9NVW2 624 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 ZNF223Q9UK11 482 aaPredicted RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 ZNF232Q9UNY5 417 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 FAM32AQ9Y421 112 aaKnown RBP15.78■□□□□ 0.12
TPM1-205ENST00000357980 PCDHGA10Q9Y5H3 936 aa15.78■□□□□ 0.12
TPM1-205ENST00000357980 C2orf92A0A1B0GVN3 265 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 PRKNO60260 465 aaPredicted RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 FTH1P19P0C7X4 201 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 PRKACGP22612 351 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 RFX3P48380 749 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 HMGA2P52926 109 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 CDH12P55289 794 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 DCAF7P61962 342 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 LAPTM4AQ15012 233 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 LIN52Q52LA3 116 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 RNF220Q5VTB9 566 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 PAPD4Q6PIY7 484 aaKnown RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 DEF8Q6ZN54 512 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 TIPARPQ7Z3E1 657 aaKnown RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 TSPYL5Q86VY4 417 aaPredicted RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 AMER2Q8N7J2 671 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 ZNF441Q8N8Z8 693 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 LMF1Q96S06 567 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 RBM4BQ9BQ04 359 aaKnown RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 RBM4Q9BWF3 364 aaKnown RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 OSBPL11Q9BXB4 747 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 WWTR1Q9GZV5 400 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 SMURF2Q9HAU4 748 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 CACYBPQ9HB71 228 aaKnown RBP15.77■□□□□ 0.11
TPM1-205ENST00000357980 A4GNTQ9UNA3 340 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 AP4B1Q9Y6B7 739 aa15.77■□□□□ 0.11
TPM1-205ENST00000357980 SPAARA0A1B0GVQ0 90 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 PLAURQ03405 335 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 GANABQ14697 944 aaKnown RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 EIPR1Q53HC9 387 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 C6orf52Q5T4I8 152 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 ANKRD34AQ69YU3 496 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms