RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ADGRE4PQ86SQ3 457 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 OR2M3Q8NG83 312 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 SMPDL3BQ92485 455 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 ELP4Q96EB1 424 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 C11orf24Q96F05 449 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 METTL2AQ96IZ6 378 aaKnown RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 AMDHD1Q96NU7 426 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FAM111AQ96PZ2 611 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 PIGQQ9BRB3 760 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 GLIPR2Q9H4G4 154 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FAM120CQ9NX05 1096 aaKnown RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 ZNF226Q9NYT6 803 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 MED11Q9P086 117 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 CLCF1Q9UBD9 225 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 A0A1W2PNV4 684 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 G3V2L1 256 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 H3BML4 177 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 UPK1AO00322 258 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 COPEO14579 308 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 SEC14L5O43304 696 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ATE1O95260 518 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 CHEK2O96017 543 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PRPS2P11908 318 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 CRHR1P34998 444 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PRKAG1P54619 331 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 DNAJB13P59910 316 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ADAM8P78325 824 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 FOXD4Q12950 439 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-204ENST00000356316 FAM153CQ494X1 144 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 GLYR1Q49A26 553 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-204ENST00000356316 FRMD7Q6ZUT3 714 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 MARCH3Q86UD3 253 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 OR2L13Q8N349 312 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 FADS6Q8N9I5 356 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 CEP70Q8NHQ1 597 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ZFP28Q8NHY6 868 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 GPR151Q8TDV0 419 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-204ENST00000356316 GFM2Q969S9 779 aaKnown RBP9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PGM2Q96G03 612 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 G6PC3Q9BUM1 346 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PRRG4Q9BZD6 226 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PLEKHF2Q9H8W4 249 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 PPCSQ9HAB8 311 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 OXSMQ9NWU1 459 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ELOVL5Q9NYP7 299 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ZNF337Q9Y3M9 751 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 C2CD3Q4AC94 2353 aa9.63□□□□□ -0.87
CAPN3-204ENST00000356316 ZFHX3Q15911 3703 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 OR2M5A3KFT3 312 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 SMIM23A6NLE4 172 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 ARHGEF9O43307 516 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 HCRTR2O43614 444 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 GMFGO60234 142 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 TNFSF13O75888 250 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PROCP04070 461 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 HRGP04196 525 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 HPGDP15428 266 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 DDX5P17844 614 aaKnown RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 MANFP55145 182 aaKnown RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 B3GALT5-AS1P59052 145 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 SIRPAP78324 504 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 FAM27E3Q08E93 113 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 HSPB3Q12988 150 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PRSS53Q2L4Q9 553 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PPP4R4Q6NUP7 873 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 SZRD1Q7Z422 152 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 OR5M1Q8NGP8 315 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 MZB1Q8WU39 189 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PPCDCQ96CD2 204 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 STARD4Q96DR4 205 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 C1GALT1C1Q96EU7 318 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 ZNF845Q96IR2 970 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 LMF2Q9BU23 707 aaKnown RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 MED18Q9BUE0 208 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PINK1Q9BXM7 581 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 LRTM1Q9HBL6 345 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 EQTNQ9NQ60 294 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 C1orf109Q9NX04 203 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 SH3BP4Q9P0V3 963 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 MID2Q9UJV3 735 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 EMCNQ9ULC0 261 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 AP4B1Q9Y6B7 739 aa9.62□□□□□ -0.87
CAPN3-204ENST00000356316 PRRC2AP48634 2157 aaKnown RBP9.62□□□□□ -0.87
CAPN3-204ENST00000356316 ANKHD1Q8IWZ3 2542 aaKnown RBP9.61□□□□□ -0.87
CAPN3-204ENST00000356316 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
CAPN3-204ENST00000356316 AZIN1O14977 448 aa9.61□□□□□ -0.87
CAPN3-204ENST00000356316 PDPK1O15530 556 aa9.61□□□□□ -0.87
CAPN3-204ENST00000356316 EMC8O43402 210 aa9.61□□□□□ -0.87
CAPN3-204ENST00000356316 AKAP10O43572 662 aa9.61□□□□□ -0.87
CAPN3-204ENST00000356316 NDUFB5O43674 189 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms