RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 NPIPA5A0A0B4J1W7 369 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 EEF1E1-BLOC1S5C9J1V9 151 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 NPIPA7E9PJI5 369 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ADAMTS4O75173 837 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 TOXO94900 526 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 NPIPA8P0DM63 369 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF181Q2M3W8 571 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 C6orf89Q6UWU4 347 aa17.03■□□□□ 0.32
COL18A1-202ENST00000355480 OR7A5Q15622 319 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 ARL14Q8N4G2 192 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 CYB561A3Q8NBI2 242 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 OR4K3Q96R72 315 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 PIGBOS1A0A0B4J2F0 54 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 A6NIZ1 184 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 TIMP2P16035 220 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 GDF1P27539 372 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 CD6P30203 668 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 SLC6A11P48066 632 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 RAP1BP61224 184 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 RAP1AP62834 184 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 CDKN3Q16667 212 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 MICAQ29983 383 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 HES5Q5TA89 166 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 SYT14Q8NB59 555 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 TAS2R3Q9NYW6 316 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 G3V2L1 256 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 FUT1P19526 365 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 ZNF423Q2M1K9 1284 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 MTFR2Q6P444 385 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 OR9Q2Q8NGE9 314 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 OR51T1Q8NGJ9 327 aa17.02■□□□□ 0.32
COL18A1-202ENST00000355480 NTRK2Q16620 822 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 PRR18Q8N4B5 295 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 ANKK1Q8NFD2 765 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 PINK1Q9BXM7 581 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 SMOXQ9NWM0 555 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 MYEF2Q9P2K5 600 aaKnown RBP17.02■□□□□ 0.31
COL18A1-202ENST00000355480 SH3BGRL2Q9UJC5 107 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 ADAMTS5Q9UNA0 930 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 DRGXA6NNA5 263 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 CER1O95813 267 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 AMY2AP04746 511 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 GABARAPL2P60520 117 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 TSPYL5Q86VY4 417 aaPredicted RBP17.02■□□□□ 0.31
COL18A1-202ENST00000355480 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 OR5D16Q8NGK9 328 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 CHPT1Q8WUD6 406 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 EIF5A2Q9GZV4 153 aaKnown RBP17.02■□□□□ 0.31
COL18A1-202ENST00000355480 ACOT13Q9NPJ3 140 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 HEBP1Q9NRV9 189 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 BTNL2Q9UIR0 455 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.31
COL18A1-202ENST00000355480 SNNO75324 88 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 POU3F2P20265 443 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 HLCSP50747 726 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 SIX1Q15475 284 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 METTL2BQ6P1Q9 378 aaKnown RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CFAP77Q6ZQR2 320 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 DCP2Q8IU60 420 aaKnown RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 ZMYND19Q96E35 227 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 PAPOLGQ9BWT3 736 aaKnown RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 RNASET2O00584 256 aaKnown RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 NME4O00746 187 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CRTAPO75718 401 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 IFNA1P01562 189 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 SCML4Q8N228 414 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 UHRF1Q96T88 793 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CPNE7Q9UBL6 633 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 TMEM189-UBE2V1I3L0A0 370 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CREBL2O60519 120 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 RAD1O60671 282 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CD38P28907 300 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 SELENOWP63302 87 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CSNK2A1P68400 391 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 SFRP4Q6FHJ7 346 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CSNK2A3Q8NEV1 391 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 OR52R1Q8NGF1 315 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 GLYATL2Q8WU03 294 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 SYT3Q9BQG1 590 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 PREBQ9HCU5 417 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 LRIT1Q9P2V4 623 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 TMX2-CTNND1H3BSU7 103 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 FRS3O43559 492 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 MPP7Q5T2T1 576 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 GSG1LQ6UXU4 331 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CPOQ8IVL8 374 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 CLSTN3Q9BQT9 956 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 OR51B6Q9H340 312 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 ERVK13-1Q9NX77 482 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
COL18A1-202ENST00000355480 KLHL9Q9P2J3 617 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 B3GALT1Q9Y5Z6 326 aa17.01■□□□□ 0.31
COL18A1-202ENST00000355480 EFCAB7A8K855 629 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PRLP01236 227 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms