RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TO15178 435 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 TLX2O43763 284 aaPredicted RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 PDX1P52945 283 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 PRSS8Q16651 343 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SAMD4BQ5PRF9 694 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 FAM74A1Q5RGS3 127 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 TMPRSS9Q7Z410 1059 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SPATA2LQ8IUW3 424 aaPredicted RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 TMEM145Q8NBT3 493 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SCRN2Q96FV2 425 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 POLR1EQ9GZS1 481 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 GLIPR2Q9H4G4 154 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ZDHHC6Q9H6R6 413 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CRIM1Q9NZV1 1036 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 APOBEC3BQ9UH17 382 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 TRAV8-7A0A075B6U6 113 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ELOVL7A1L3X0 281 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ULK1O75385 1050 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CLDN9O95484 217 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 PNPP00491 289 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 LDLRP01130 860 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 DRD1P21728 446 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 TOMM34Q15785 309 aaPredicted RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 ARMCX4Q5H9R4 360 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 UTF1Q5T230 341 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CRIP3Q6Q6R5 217 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ZNF367Q7RTV3 350 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 PROSER1Q86XN7 944 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ST13P4Q8IZP2 240 aaPredicted RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 NCLNQ969V3 563 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 PRSS27Q9BQR3 290 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 C1orf109Q9NX04 203 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 TESQ9UGI8 421 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 TMCO1Q9UM00 188 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SH3D21A4FU49 640 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ZNF814B7Z6K7 855 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ZNF197O14709 1029 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 PSMD3O43242 534 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 IGF2P01344 180 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CCNA2P20248 432 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 LPOP22079 712 aaPredicted RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 TRIM23P36406 574 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 IL12RB1P42701 662 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SLC9A3P48764 834 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 H2BFSP57053 126 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 OR12D2P58182 307 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 GUCA2AQ02747 115 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SF3A2Q15428 464 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 MAPRE1Q15691 268 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 AGTRAPQ6RW13 159 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SMARCD3Q6STE5 483 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CCDC190Q86UF4 302 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 THOC6Q86W42 341 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 TRIM63Q969Q1 353 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 RMI1Q9H9A7 625 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 SRA1Q9HD15 236 aaKnown RBP5.19□□□□□ -1.58
CD47-201ENST00000355354 SEMA3GQ9NS98 782 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 ZNF319Q9P2F9 582 aa5.19□□□□□ -1.58
CD47-201ENST00000355354 CXorf51AA0A1B0GTR3 108 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 CPSF4LA6NMK7 179 aaKnown RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 H7C4K7 107 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 CCRL2O00421 344 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 MFN2O95140 757 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 CYP2A6P11509 494 aaPredicted RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 PSMA3P25788 255 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 ACRV1P26436 265 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 NOVA1P51513 510 aaKnown RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 ITGA1P56199 1179 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 CFHR1Q03591 330 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 WSCD2Q2TBF2 565 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 PRR31Q5SQ13 230 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 FAM205BPQ63HN1 556 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 TMEM86AQ8N2M4 240 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 TTC29Q8NA56 475 aaPredicted RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 PIK3R3Q92569 461 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 TTC9Q92623 222 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 DEPDC7Q96QD5 511 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 TMEM246Q9BRR3 403 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 OR2AG1Q9H205 316 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 FN3KRPQ9HA64 309 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 LRTM1Q9HBL6 345 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 PCOLCE2Q9UKZ9 415 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 A0A1W2PQL4 384 aaPredicted RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 PRAMEF26H0Y7S4 382 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 ANGPT2O15123 496 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 UGT2B17O75795 530 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 PPP1R3DO95685 299 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 HMGN2P05204 90 aaKnown RBP5.18□□□□□ -1.58
CD47-201ENST00000355354 BCHEP06276 602 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 IGHV4-34P06331 123 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 FURINP09958 794 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 HLA-DOBP13765 273 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 ATP5DP30049 168 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 SERPINB9P50453 376 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 IL2P60568 153 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 FRA10AC1Q70Z53 315 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 GPR148Q8TDV2 347 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 SLC38A1Q9H2H9 487 aa5.18□□□□□ -1.58
CD47-201ENST00000355354 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms