RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CHD6Q8TD26 2715 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 NPIPA5A0A0B4J1W7 369 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 C2orf72A6NCS6 295 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 EVPLLA8MZ36 301 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 NPIPA7E9PJI5 369 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 SORBS2O94875 1100 aaKnown RBP20.31■□□□□ 0.84
SHMT1-203ENST00000354098 ZIC2O95409 532 aaPredicted RBP20.31■□□□□ 0.84
SHMT1-203ENST00000354098 NPPAP01160 153 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 NPIPA8P0DM63 369 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 PTGDSP41222 190 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 ANXA11P50995 505 aaKnown RBP20.31■□□□□ 0.84
SHMT1-203ENST00000354098 TXNL4AP83876 142 aaKnown RBP20.31■□□□□ 0.84
SHMT1-203ENST00000354098 CBX1P83916 185 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 PMP22Q01453 160 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 FADDQ13158 208 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 MAPK11Q15759 364 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 RABL3Q5HYI8 236 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 ROPN1LQ96C74 230 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 RAD21L1Q9H4I0 556 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 METTL7AQ9H8H3 244 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 GALNT9Q9HCQ5 603 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 GID8Q9NWU2 228 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 TAGLN3Q9UI15 199 aa20.31■□□□□ 0.84
SHMT1-203ENST00000354098 KALRNO60229 2985 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 TNFRSF21O75509 655 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 CBX6O95503 412 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 MAGEA8P43361 318 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 NUDT2P50583 147 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 GRAMD1BQ3KR37 738 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 GPAT3Q53EU6 434 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 OR2M7Q8NG81 312 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 MAL2Q969L2 176 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 TAAR6Q96RI8 345 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 ANGPTL4Q9BY76 406 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 RTN4RQ9BZR6 473 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 MKLN1Q9UL63 735 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 EML6Q6ZMW3 1958 aa20.3■□□□□ 0.84
SHMT1-203ENST00000354098 PRAMEF25A6NGN4 478 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 HS6ST1O60243 411 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 FADS1O60427 444 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 AK1P00568 194 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 TFPTP0C1Z6 253 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 ATP6V1C1P21283 382 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 EVI2BP34910 448 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RFC3P40938 356 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 MEOX1P50221 254 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RPP38P78345 283 aaKnown RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 KRT72Q14CN4 511 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 INPP5JQ15735 1006 aaPredicted RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RPUSD3Q6P087 351 aaKnown RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 APOOLQ6UXV4 268 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RNF138Q8WVD3 245 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 ZNF350Q9GZX5 532 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 KLRF1Q9NZS2 232 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 CORO2BQ9UQ03 480 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 ANKRD33BA6NCL7 494 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 C17orf51A8MQB3 221 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 KLRC4-KLRK1H3BQV0 150 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 ADAM10O14672 748 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 STX11O75558 287 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 H6PDO95479 791 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 CHRM4P08173 479 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 NR2F1P10589 423 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 BMP2P12643 396 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 SLC6A2P23975 617 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 KCNJ2P63252 427 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 ART3Q13508 389 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 GPR68Q15743 365 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 FLYWCH1Q4VC44 716 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 TMEM81Q6P7N7 255 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 CISD2Q8N5K1 135 aaKnown RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 SLC38A5Q8WUX1 472 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 NTNG2Q96CW9 530 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 FAM173AQ9BQD7 235 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 GPATCH1Q9BRR8 931 aaKnown RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 DOHHQ9BU89 302 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RUBCNLQ9H714 662 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 KAT8Q9H7Z6 458 aaKnown RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 TUBA8Q9NY65 449 aaPredicted RBP20.29■□□□□ 0.84
SHMT1-203ENST00000354098 LIPT1Q9Y234 373 aa20.29■□□□□ 0.84
SHMT1-203ENST00000354098 RASAL1O95294 804 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 OXSR1O95747 527 aaPredicted RBP20.28■□□□□ 0.84
SHMT1-203ENST00000354098 BCHEP06276 602 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 CHRNEQ04844 493 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 ADRM1Q16186 407 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 PRR30Q53SZ7 412 aaPredicted RBP20.28■□□□□ 0.84
SHMT1-203ENST00000354098 TYW3Q6IPR3 259 aaKnown RBP20.28■□□□□ 0.84
SHMT1-203ENST00000354098 FRRS1Q6ZNA5 592 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 TRPM8Q7Z2W7 1104 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 POGLUT1Q8NBL1 392 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 OR8J3Q8NGG0 315 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 FBXO27Q8NI29 283 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 ZG16BQ96DA0 208 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 TRNT1Q96Q11 434 aaKnown RBP20.28■□□□□ 0.84
SHMT1-203ENST00000354098 OSBPL11Q9BXB4 747 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 P2RX2Q9UBL9 471 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 KCNE5Q9UJ90 142 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 ANAPC2Q9UJX6 822 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 NTNG1Q9Y2I2 539 aa20.28■□□□□ 0.84
SHMT1-203ENST00000354098 WDR45Q9Y484 360 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms