RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 DIRAS2Q96HU8 199 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MS4A8Q9BY19 250 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 RACGAP1Q9H0H5 632 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SRMSQ9H3Y6 488 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 PELI2Q9HAT8 420 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MRPS30Q9NP92 439 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TVP23BQ9NYZ1 205 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MGAT4BQ9UQ53 548 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 CCDC182A6NF36 153 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ANKDD1BA6NHY2 528 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 C5orf58C9J3I9 102 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 NDUFB5O43674 189 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 B4GALT2O60909 372 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TMCC2O75069 709 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 IL1AP01583 271 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 H1F0P07305 194 aaKnown RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TRAPPC2P0DI81 140 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TRAPPC2BP0DI82 140 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CTSEP14091 401 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SDC2P34741 201 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 BSGP35613 385 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ETV5P41161 510 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ETV1P50549 477 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 NXPH1P58417 271 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 HOXC5Q00444 222 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 PIN1Q13526 163 aaPredicted RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ZIC1Q15915 447 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 OCLNQ16625 522 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CLPPQ16740 277 aaPredicted RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 GPAT3Q53EU6 434 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SNAP47Q5SQN1 464 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SLC35F1Q5T1Q4 408 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 RNLSQ5VYX0 342 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 FCRL6Q6DN72 434 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 XKRXQ6PP77 449 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 FAM92BQ6ZTR7 304 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SLC9B2Q86UD5 537 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 NOXA1Q86UR1 476 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SLC30A8Q8IWU4 369 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TRIM48Q8IWZ4 208 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 RDH10Q8IZV5 341 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SYT14Q8NB59 555 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SIMC1Q8NDZ2 872 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 OR52I1Q8NGK6 324 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 OR10G6Q8NH81 332 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ZDHHC1Q8WTX9 485 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 RSC1A1Q92681 617 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 NEURL3Q96EH8 262 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 DHRS1Q96LJ7 313 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 GSDMCQ9BYG8 508 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 OR6C2Q9NZP2 312 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 C5AR2Q9P296 337 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SNX7Q9UNH6 387 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CARD8Q9Y2G2 431 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CCDC88CQ9P219 2028 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 FAAHO00519 579 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 PLA2G10O15496 165 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SEC14L5O43304 696 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TMPRSS11DO60235 418 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 DNAJB6O75190 326 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 APOL3O95236 402 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 LGI1O95970 557 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 GIMD1P0DJR0 217 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 UGT2B7P16662 529 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CPEP16870 476 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 PRKCAP17252 672 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TYRP1P17643 537 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 MYL9P24844 172 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 GPC1P35052 558 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 KIR2DL3P43628 341 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 GSTM5P46439 218 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CD83Q01151 205 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 DEFB133Q30KQ1 61 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SYT14P1Q58G82 188 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 PDZK1Q5T2W1 519 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SAXO2Q658L1 398 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 HIST2H2AA3Q6FI13 130 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF793Q6ZN11 406 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 COMTD1Q86VU5 262 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 VWA5B2Q8N398 1253 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 CLDN22Q8N7P3 220 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 LMX1AQ8TE12 382 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TM9SF4Q92544 642 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 LRR1Q96L50 414 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TEFMQ96QE5 360 aaKnown RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 AIF1LQ9BQI0 150 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 FUZQ9BT04 418 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 A4GALTQ9NPC4 353 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 SEMA3GQ9NS98 782 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 TESQ9UGI8 421 aaKnown RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 DIMT1Q9UNQ2 313 aaKnown RBP8.04□□□□□ -1.12
TRIM55-204ENST00000353317 HEBP2Q9Y5Z4 205 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 MAU2Q9Y6X3 613 aa8.04□□□□□ -1.12
TRIM55-204ENST00000353317 NINQ8N4C6 2090 aa8.03□□□□□ -1.12
TRIM55-204ENST00000353317 A0A1B0GVT2 93 aa8.03□□□□□ -1.12
TRIM55-204ENST00000353317 HMGN4O00479 90 aa8.03□□□□□ -1.12
TRIM55-204ENST00000353317 HRO43593 1189 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms