RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SHDQ96IW2 340 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 MAP3K3Q99759 626 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 TSSK6Q9BXA6 273 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 PRRG3Q9BZD7 231 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 RACGAP1Q9H0H5 632 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 MRPS33Q9Y291 106 aaKnown RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SCN2AQ99250 2005 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 A0A0A6YYC8 382 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 I3L1I5 382 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 TLX2O43763 284 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 PRKYO43930 277 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 CTSBP07858 339 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 GUSBP08236 651 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 DBTP11182 482 aaKnown RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 NID1P14543 1247 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 GADD45AP24522 165 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 FPR3P25089 353 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 RGS6P49758 472 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF136P52737 540 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 HOXC5Q00444 222 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF91Q05481 1191 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 NR1D2Q14995 579 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SLC27A4Q6P1M0 643 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 MBOAT2Q6ZWT7 520 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 NKAIN4Q8IVV8 208 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SHISA5Q8N114 240 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 VWA5B2Q8N398 1253 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SLC15A4Q8N697 577 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 OR6C4Q8NGE1 309 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 S100ZQ8WXG8 99 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 PIK3R3Q92569 461 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 PLEKHA8Q96JA3 519 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF285Q96NJ3 590 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ARMC7Q9H6L4 198 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 KRCC1Q9NPI7 259 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 PLCL2Q9UPR0 1127 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 HYKKA2RU49 373 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 CLDN25C9JDP6 229 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 FOXS1O43638 330 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 CTNSO60931 367 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 CBX7O95931 251 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 MAOBP27338 520 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 GABRA3P34903 492 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 HNRNPKP61978 463 aaKnown RBP eCLIP15.53■□□□□ 0.08
SAMM50-201ENST00000350028 FAM53BQ14153 422 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 SNAPC1Q16533 368 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 MAPK14Q16539 360 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 GARNL3Q5VVW2 1013 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 OGFOD3Q6PK18 319 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 ZBTB46Q86UZ6 589 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF595Q8IYB9 648 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 OSTF1Q92882 214 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 FGF11Q92914 225 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 FAM46AQ96IP4 442 aaKnown RBP15.53■□□□□ 0.08
SAMM50-201ENST00000350028 SLC38A2Q96QD8 506 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 MGLLQ99685 303 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 DCSTAMPQ9H295 470 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 EGLN3Q9H6Z9 239 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 HMG20AQ9NP66 347 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 NLGN3Q9NZ94 848 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 WNT16Q9UBV4 365 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 OSGIN1Q9UJX0 560 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 FBXL21Q9UKT6 434 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 ERGIC3Q9Y282 383 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 NTNG1Q9Y2I2 539 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 PCDHGA3Q9Y5H0 932 aa15.53■□□□□ 0.08
SAMM50-201ENST00000350028 IRGMA1A4Y4 181 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 TRAPPC13A5PLN9 417 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 SNTNA6NMZ2 147 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 AQP9O43315 295 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 BRINP1O60477 761 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 FMO6PO60774 539 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 NSA2O95478 260 aaKnown RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 THY1P04216 161 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 ADRA2AP08913 450 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 OPRL1P41146 370 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF155Q12901 538 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 COL9A2Q14055 689 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 MED22Q15528 200 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 TIMM50Q3ZCQ8 353 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 KLHL22Q53GT1 634 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 SYT14P1Q58G82 188 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 C16orf87Q6PH81 154 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 USP43Q70EL4 1123 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 GALNT12Q8IXK2 581 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 OR52R1Q8NGF1 315 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 TMEM163Q8TC26 289 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 FNDC8Q8TC99 324 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF582Q96NG8 517 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 OR5M11Q96RB7 305 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 LMF2Q9BU23 707 aaKnown RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 TEX12Q9BXU0 123 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 PLA2G12AQ9BZM1 189 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 WDR12Q9GZL7 423 aaKnown RBP15.52■□□□□ 0.08
SAMM50-201ENST00000350028 CHRNA10Q9GZZ6 450 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 MIR1-1HGQ9H1L0 117 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 TAS2R16Q9NYV7 291 aa15.52■□□□□ 0.08
SAMM50-201ENST00000350028 B3GNT3Q9Y2A9 372 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms