RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 ERAL1O75616 437 aaKnown RBP13.12□□□□□ -0.31
CSHL1-203ENST00000346606 PLAUP00749 431 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 CRHP06850 196 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 POU2F1P14859 743 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 CREB1P16220 341 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 CLDN15P56746 228 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 B3GALT5-AS1P59052 145 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
CSHL1-203ENST00000346606 ZNF844Q08AG5 666 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 SNTA1Q13424 505 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 SPIN4Q56A73 249 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 C6orf163Q5TEZ5 329 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 OR7G1Q8NGA0 311 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 FIG4Q92562 907 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
CSHL1-203ENST00000346606 ITPAQ9BY32 194 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 PSME2Q9UL46 239 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 FIS1Q9Y3D6 152 aa13.12□□□□□ -0.31
CSHL1-203ENST00000346606 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 C17orf51A8MQB3 221 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 RNF223E7ERA6 249 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 H0YC42 278 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 UROSP10746 265 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 CPMP14384 443 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 NT5EP21589 574 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 TCEA1P23193 301 aaKnown RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SRD5A2P31213 254 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 TPD52P55327 224 aaPredicted RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 ATP5J2P56134 94 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SIRPAP78324 504 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 DMTNQ08495 405 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 EXOSC7Q15024 291 aaKnown RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 CEP85LQ5SZL2 805 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 CLEC6AQ6EIG7 209 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SLC48A1Q6P1K1 146 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 AAGABQ6PD74 315 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 PLCZ1Q86YW0 608 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 ZNF610Q8N9Z0 462 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 MECRQ9BV79 373 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 EBPLQ9BY08 206 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 TNFRSF12AQ9NP84 129 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
CSHL1-203ENST00000346606 ELOVL5Q9NYP7 299 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 CES1P1Q9UKY3 287 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 ZNF780BQ9Y6R6 833 aa13.11□□□□□ -0.31
CSHL1-203ENST00000346606 FRG2CA6NGY1 282 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 AZIN1O14977 448 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 C8BP07358 591 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 IL3P08700 152 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 CSNK2A2P19784 350 aaPredicted RBP13.1□□□□□ -0.31
CSHL1-203ENST00000346606 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSHL1-203ENST00000346606 OR5M10Q6IEU7 315 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 FAM180BQ6P0A1 224 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 PODNL1Q6PEZ8 512 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 TRIM46Q7Z4K8 759 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 P4HA3Q7Z4N8 544 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 CDC26Q8NHZ8 85 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 C16orf78Q8WTQ4 265 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 ZIM3Q96PE6 472 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 SLC39A3Q9BRY0 314 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 TRMOQ9BU70 441 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 BRINP2Q9C0B6 783 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 EML4Q9HC35 981 aaKnown RBP13.1□□□□□ -0.31
CSHL1-203ENST00000346606 PFDN4Q9NQP4 134 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 ZNF639Q9UID6 485 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 UTS2RQ9UKP6 389 aa13.1□□□□□ -0.31
CSHL1-203ENST00000346606 MED12LQ86YW9 2145 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 SLC28A1O00337 649 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 EMC8O43402 210 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 DSCAMO60469 2012 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 NPHS1O60500 1241 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 CBX7O95931 251 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 CHEK2O96017 543 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 CHRNGP07510 517 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 ANXA4P09525 319 aaPredicted RBP13.09□□□□□ -0.31
CSHL1-203ENST00000346606 KCNJ5P48544 419 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
CSHL1-203ENST00000346606 DUSP2Q05923 314 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 PLCXD2Q0VAA5 305 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
CSHL1-203ENST00000346606 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 GUSBP1Q15486 140 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 BCL2A1Q16548 175 aa13.09□□□□□ -0.31
CSHL1-203ENST00000346606 PRICKLE4Q2TBC4 344 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms