RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 EIF2S1P05198 315 aaKnown RBP14.4□□□□□ -0.1
UPF3B-202ENST00000345865 CLEC2LP0C7M8 214 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 MSL3P1P0C860 447 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 LIMS3P0CW19 117 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 LIMS4P0CW20 117 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 PRG2P13727 222 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 CPMP14384 443 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 IFNGR2P38484 337 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 WNT4P56705 351 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 RAB40BQ12829 278 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 GPR68Q15743 365 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 CARTPTQ16568 116 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 KLHL22Q53GT1 634 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 ZNF628Q5EBL2 1059 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 FHL5Q5TD97 284 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 RRM2BQ7LG56 351 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 OR5T3Q8NGG3 340 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 ASB15Q8WXK1 588 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 HPS1Q92902 700 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 NELL2Q99435 816 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 ANKRD19PQ9H560 264 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 SLC28A3Q9HAS3 691 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 KLHL28Q9NXS3 571 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 IL20Q9NYY1 176 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 KCNE5Q9UJ90 142 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 SLC7A7Q9UM01 511 aa14.4□□□□□ -0.1
UPF3B-202ENST00000345865 H0YGG7 62 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 SLC2A10O95528 541 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 FPR3P25089 353 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 ARF3P61204 181 aaPredicted RBP14.4□□□□□ -0.11
UPF3B-202ENST00000345865 EEF1A1P68104 462 aaKnown RBP14.4□□□□□ -0.11
UPF3B-202ENST00000345865 BNC1Q01954 994 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 MINDY4Q4G0A6 757 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 ZMAT1Q5H9K5 638 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 LAX1Q8IWV1 398 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 OR9Q1Q8NGQ5 310 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 GPR151Q8TDV0 419 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 ARSGQ96EG1 525 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 SLC30A2Q9BRI3 323 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 SSR3Q9UNL2 185 aa14.4□□□□□ -0.11
UPF3B-202ENST00000345865 SF3B6Q9Y3B4 125 aaKnown RBP14.4□□□□□ -0.11
UPF3B-202ENST00000345865 A0A0C4DFX4 3053 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 NPIPA5A0A0B4J1W7 369 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 NPIPA7E9PJI5 369 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 SURF4O15260 269 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 HCRTR1O43613 425 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 FGF17O60258 216 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 CDRT1O95170 752 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 DLGAP3O95886 979 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 LALBAP00709 142 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 CELA2BP08218 269 aaPredicted RBP14.39□□□□□ -0.11
UPF3B-202ENST00000345865 NPIPA8P0DM63 369 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 PPP1CAP62136 330 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 RPS25P62851 125 aaKnown RBP14.39□□□□□ -0.11
UPF3B-202ENST00000345865 DBPQ10586 325 aaPredicted RBP14.39□□□□□ -0.11
UPF3B-202ENST00000345865 C22orf42Q6IC83 251 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 DESI1Q6ICB0 168 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 WDR88Q6ZMY6 472 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 MBOAT2Q6ZWT7 520 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 GALNT12Q8IXK2 581 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 GJD3Q8N144 294 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 SLC22A18ASQ8N1D0 253 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF485Q8NCK3 441 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 PSD4Q8NDX1 1056 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 BBS1Q8NFJ9 593 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 OR4F15Q8NGB8 312 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 RPLP0P6Q8NHW5 317 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 PIK3R3Q92569 461 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 NR4A3Q92570 626 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 ITPKCQ96DU7 683 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 PRSS27Q9BQR3 290 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 ADAP2Q9NPF8 381 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 KLHL3Q9UH77 587 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 MUTYHQ9UIF7 546 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 PIAS3Q9Y6X2 628 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 V9GYH0 126 aa14.39□□□□□ -0.11
UPF3B-202ENST00000345865 LOC110117498-PIK3R3F6TDL0 507 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 TNFRSF10CO14798 259 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 RGS5O15539 181 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 SNX4O95219 450 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 GKN3PP0CG01 181 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 MYL12AP19105 171 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 FUT1P19526 365 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 EIF2B2P49770 351 aaKnown RBP14.38□□□□□ -0.11
UPF3B-202ENST00000345865 RORCP51449 518 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 AADACL4Q5VUY2 407 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF620Q6ZNG0 422 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 Q6ZSR6 202 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 LHFPL3Q86UP9 236 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 PEX5LQ8IYB4 626 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZFP41Q8N8Y5 198 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 SYT14Q8NB59 555 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 SLC38A2Q96QD8 506 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 TM9SF2Q99805 663 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 ZFYVE21Q9BQ24 234 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 PTGFRNQ9P2B2 879 aa14.38□□□□□ -0.11
UPF3B-202ENST00000345865 CRNNQ9UBG3 495 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms