RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GFRA1P56159 465 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 SNTB1Q13884 538 aaKnown RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 ZNHIT3Q15649 155 aaPredicted RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 DECR1Q16698 335 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 APOOLQ6UXV4 268 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 R3HCC1LQ7Z5L2 792 aaKnown RBP13.1□□□□□ -0.31
HMGN3-202ENST00000344726 RIMKLAQ8IXN7 391 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 OR14L1PQ8NHC6 308 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 TUBGCP3Q96CW5 907 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 C16orf58Q96GQ5 468 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
HMGN3-202ENST00000344726 EMC8O43402 210 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 ZIC3O60481 467 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 ZWINTO95229 277 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 ACTL6AO96019 429 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 G6PDP11413 515 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 TCEA1P23193 301 aaKnown RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 RFX3P48380 749 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 SLC1A6P48664 564 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 STARP49675 285 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 MRPS22P82650 360 aaKnown RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 AKAP6Q13023 2319 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 MLC1Q15049 377 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 MFSD12Q6NUT3 480 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 SZRD1Q7Z422 152 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 GALNT10Q86SR1 603 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 HEATR5AQ86XA9 2040 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 OR2M3Q8NG83 312 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 OTUB1Q96FW1 271 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 MS4A4EQ96PG1 132 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 DSN1Q9H410 356 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
HMGN3-202ENST00000344726 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 ABCG2Q9UNQ0 655 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 RAP2CQ9Y3L5 183 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
HMGN3-202ENST00000344726 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 UTS2O95399 124 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 DPP4P27487 766 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 LHX2P50458 406 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 ZNF136P52737 540 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 WDR4P57081 412 aaKnown RBP13.08□□□□□ -0.32
HMGN3-202ENST00000344726 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 EMX2Q04743 252 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 STX5Q13190 355 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 DUSP5Q16690 384 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 GRAMD1BQ3KR37 738 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-202ENST00000344726 CPTPQ5TA50 214 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 NSUN5P2Q63ZY6 315 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 MARCH3Q86UD3 253 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 IFNEQ86WN2 208 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 ANKRD42Q8N9B4 389 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 FAM110BQ8TC76 370 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 SLC9A6Q92581 669 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 TRIB1Q96RU8 372 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 YIPF4Q9BSR8 244 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 G6PC3Q9BUM1 346 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 CXorf36Q9H7Y0 433 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 MED11Q9P086 117 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 PPP4R1LQ9P1A2 415 aa13.08□□□□□ -0.32
HMGN3-202ENST00000344726 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-202ENST00000344726 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.08□□□□□ -0.32
HMGN3-202ENST00000344726 MRPS18CQ9Y3D5 142 aaKnown RBP13.08□□□□□ -0.32
HMGN3-202ENST00000344726 MBD3L4A6NDZ8 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 MBD3L3A6NE82 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 MBD3L5A6NJ08 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 KCNK2O95069 426 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 KCNH1O95259 989 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 C6orf47O95873 294 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 CPN1P15169 458 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 PRPS1L1P21108 318 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms