RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TSSK4Q6SA08 328 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 IGFN1Q86VF2 1251 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 MMABQ96EY8 250 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 DUSP15Q9H1R2 295 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 FAIMQ9NVQ4 179 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 CLN6Q9NWW5 311 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF232Q9UNY5 417 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 IFT52Q9Y366 437 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 SCN2AQ99250 2005 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 CENPVL1A0A0U1RR11 272 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 TGFBR1P36897 503 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 GABRA4P48169 554 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 CLK1P49759 484 aaKnown RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 OR1D5P58170 312 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF155Q12901 538 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ITGADQ13349 1161 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ERV3-1Q14264 604 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 KCNAB1Q14722 419 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 LARS2Q15031 903 aaKnown RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 LINC00299Q6ZSB3 139 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 TMEM105Q8N8V8 129 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 DRAXINQ8NBI3 349 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 OR52R1Q8NGF1 315 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 CTHRC1Q96CG8 243 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ZHX1-C8orf76Q96EF9 292 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 WDR12Q9GZL7 423 aaKnown RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF350Q9GZX5 532 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 AKIP1Q9NQ31 210 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 DUSP22Q9NRW4 184 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 MRPS33Q9Y291 106 aaKnown RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 B3GNT3Q9Y2A9 372 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 PMF1-BGLAPU3KQ54 211 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 SH3D21A4FU49 640 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 AIREO43918 545 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 STX11O75558 287 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 NSA2O95478 260 aaKnown RBP17.31■□□□□ 0.36
HOXA9-201ENST00000343483 ADORA3P0DMS8 318 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 FNTBP49356 437 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 EPHA4P54764 986 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 FAM53BQ14153 422 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 AMZ1Q400G9 498 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 FIGNL1Q6PIW4 674 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF836Q6ZNA1 936 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 GALNT12Q8IXK2 581 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 MORN4Q8NDC4 146 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 S100ZQ8WXG8 99 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 SPRTNQ9H040 489 aaPredicted RBP17.31■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
HOXA9-201ENST00000343483 OR2W5A6NFC9 320 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 EFCAB10A6NFE3 127 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 AGAP5A6NIR3 686 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 AP3D1O14617 1153 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 CBX7O95931 251 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 PTHP01270 115 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 MMP11P24347 488 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 GABRA3P34903 492 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TRHRP34981 398 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ILKQ13418 452 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 NIPAL1Q6NVV3 410 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ZCCHC12Q6PEW1 402 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ZER1Q7Z7L7 766 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 RBM18Q96H35 190 aaKnown RBP17.3■□□□□ 0.36
HOXA9-201ENST00000343483 COX4I2Q96KJ9 171 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF285Q96NJ3 590 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 STACQ99469 402 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 SEMA4GQ9NTN9 838 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TBCCD1Q9NVR7 557 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 FBXO34Q9NWN3 711 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 SATB2Q9UPW6 733 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ERGIC3Q9Y282 383 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 NTNG1Q9Y2I2 539 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 CACNA1IQ9P0X4 2223 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TMEM131Q92545 1883 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TGFBR3LH3BV60 316 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 CYP7B1O75881 506 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 MYF5P13349 255 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TNNI3P19429 210 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 GADD45AP24522 165 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 IFNA8P32881 189 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 SEPHS1P49903 392 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 RNF144AP50876 292 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-201ENST00000343483 IRF3Q14653 427 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 TCTE1Q5JU00 501 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ENTPD8Q5MY95 495 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 EXOSC6Q5RKV6 272 aaKnown RBP17.3■□□□□ 0.36
HOXA9-201ENST00000343483 DCDC5Q6ZRR9 648 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 PLEKHM3Q6ZWE6 761 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 SLC46A3Q7Z3Q1 461 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF619Q8N2I2 560 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 SLC25A45Q8N413 288 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 LINC00471Q8N535 108 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 Q8N9G6 341 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-201ENST00000343483 OR6C4Q8NGE1 309 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 RIT1Q92963 219 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 CRELD1Q96HD1 420 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 PRTFDC1Q9NRG1 225 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 EPHA6Q9UF33 1036 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 OSGIN1Q9UJX0 560 aa17.3■□□□□ 0.36
HOXA9-201ENST00000343483 NPIPA5A0A0B4J1W7 369 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 PRR33A8MZF0 331 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms