RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SBSNQ6UWP8 590 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 MIB2Q96AX9 1013 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 HRH4Q9H3N8 390 aa16.79■□□□□ 0.28
SMAD4-201ENST00000342988 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 FER1L5A0AVI2 2057 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 JRKO75564 520 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SHMT2P34897 504 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ZDHHC14Q8IZN3 488 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 RYDENQ9NUL5 291 aaKnown RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 C14orf119Q9NWQ9 140 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 PTP4A2Q12974 167 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF331Q9NQX6 463 aaPredicted RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 UGT2A1Q9Y4X1 527 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SLC15A5A6NIM6 579 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 RFXAPO00287 272 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TACR3P29371 465 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 OR4A16Q8NH70 328 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TOMM40LQ969M1 308 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 MFFQ9GZY8 342 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 A0A096LPI6 279 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TMEM11P17152 192 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 PTPRCAPQ14761 206 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SLX4IPQ5VYV7 408 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TRUB1Q8WWH5 349 aaKnown RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 A0A1W2PPK0 400 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 A6NIZ1 184 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 H3BSA7 217 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 OPN1SWP03999 348 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 HBQ1P09105 142 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 DTYMKP23919 212 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TRHRP34981 398 aaPredicted RBP16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ECI1P42126 302 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 RAP1BP61224 184 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 RAP1AP62834 184 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SIGLECL1Q8N7X8 197 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 OR13C5Q8NGS8 318 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 OR13C2Q8NGS9 318 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ZCCHC4Q9H5U6 513 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 PPP1R2P9O14990 202 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 GCGRP47871 477 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 MTNR1AP48039 350 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 TAS2R40P59535 323 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 PCBD1P61457 104 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 MPEG1Q2M385 716 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 CILP2Q8IUL8 1156 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 FAXDC2Q96IV6 333 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 CEPT1Q9Y6K0 416 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 SPATA31A3Q5VYP0 1347 aa16.78■□□□□ 0.28
SMAD4-201ENST00000342988 CHRNA1P02708 482 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 CRABP1P29762 137 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 NAA10P41227 235 aaPredicted RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 RBPJQ06330 500 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 TMEM151AQ8N4L1 468 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 SUV39H2Q9H5I1 410 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 INTS1Q8N201 2190 aaKnown RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 SPOCK3Q9BQ16 436 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 SLC23A2Q9UGH3 650 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 DOPEY2Q9Y3R5 2298 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 ASTN1O14525 1302 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 DCDC2BA2VCK2 349 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 RAB3DO95716 219 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 PREPP48147 710 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 VAMP3Q15836 100 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 LRRC25Q8N386 305 aaPredicted RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 TSGA13Q96PP4 275 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 GAPDHSO14556 408 aaPredicted RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 DUX1O43812 170 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 HLA-AP01891 365 aaKnown RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 LAP3P28838 519 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 FBXW12Q6X9E4 464 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 ADGRG3Q86Y34 549 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 FNDC8Q8TC99 324 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 SMAP2Q8WU79 429 aaPredicted RBP16.77■□□□□ 0.28
SMAD4-201ENST00000342988 MICU1Q9BPX6 476 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 AKAP11Q9UKA4 1901 aa16.77■□□□□ 0.28
SMAD4-201ENST00000342988 TSPAN6O43657 245 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 RPS17P08708 135 aaKnown RBP16.77■□□□□ 0.27
SMAD4-201ENST00000342988 EMX2Q04743 252 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 IL20RBQ6UXL0 311 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 IL34Q6ZMJ4 242 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 ASRGL1Q7L266 308 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 KLBQ86Z14 1044 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 EMID1Q96A84 441 aaPredicted RBP16.77■□□□□ 0.27
SMAD4-201ENST00000342988 FCF1Q9Y324 198 aaKnown RBP16.77■□□□□ 0.27
SMAD4-201ENST00000342988 MYO7BQ6PIF6 2116 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 MMP2P08253 660 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 SNCAP37840 140 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 APOFQ13790 326 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 MEP1AQ16819 746 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 YIF1BQ5BJH7 314 aa16.77■□□□□ 0.27
SMAD4-201ENST00000342988 OR8U1Q8NH10 309 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms