RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 RUNDC3AQ59EK9 446 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 BMPERQ8N8U9 685 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 MORN4Q8NDC4 146 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 EEF1AKMT1Q8WVE0 214 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 PGAP3Q96FM1 320 aaPredicted RBP7.86□□□□□ -1.15
HMGB1-203ENST00000341423 OR4C12Q96R67 309 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 ARMCX1Q9P291 453 aa7.86□□□□□ -1.15
HMGB1-203ENST00000341423 RGS9O75916 674 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 DBTP11182 482 aaKnown RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SEMA3BQ13214 749 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ARFRP1Q13795 201 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 MPPED2Q15777 294 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 WDR74Q6RFH5 385 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 PAQR3Q6TCH7 311 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SLITRK4Q8IW52 837 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 DEFB108BQ8NET1 73 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RHEBL1Q8TAI7 183 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 APOPT1Q96IL0 206 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RAB18Q9NP72 206 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TRIM36Q9NQ86 728 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ONECUT1Q9UBC0 465 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SLC35A3Q9Y2D2 325 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 CCDC168Q8NDH2 2452 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 NUMA1Q14980 2115 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 A0A0B4J203 849 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FAM92AA1XBS5 289 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 A6NIZ1 184 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 CPSF4LA6NMK7 179 aaKnown RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 F2RL2O00254 374 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 POU3F4P49335 361 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SH3BGRP55822 239 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 DSCR9P59020 149 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RAP1BP61224 184 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RAP1AP62834 184 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SH3BP2P78314 561 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ARF5P84085 180 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ASTE1Q2TB18 679 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LRRC10Q5BKY1 277 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ATF6BQ99941 703 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 MYOTQ9UBF9 498 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 CLDN25C9JDP6 229 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ATP8B1O43520 1251 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 GABRR1P24046 479 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ACP1P24666 158 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ASCL1P50553 236 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 IST1P53990 364 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF763Q0D2J5 394 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 NPY5RQ15761 445 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FAM182AQ5T1J6 154 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SMARCD3Q6STE5 483 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 MON1BQ7L1V2 547 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SPRED2Q7Z698 418 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TMEM185AQ8NFB2 350 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 PNPT1Q8TCS8 783 aaKnown RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 SAP25Q8TEE9 199 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 AGAP11Q8TF27 550 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 PTPMT1Q8WUK0 201 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 PEX13Q92968 403 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TCF7L2Q9NQB0 619 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TBCCD1Q9NVR7 557 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LPAR3Q9UBY5 353 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 BTBD3Q9Y2F9 522 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LTN1O94822 1766 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 OR51F1A6NGY5 319 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FZD7O75084 574 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FAM155BO75949 473 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 AQP1P29972 269 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RNPS1Q15287 305 aaKnown RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ALG10BQ5I7T1 473 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LIPJQ5W064 366 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF101Q8IZC7 436 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FITM2Q8N6M3 262 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 OR13C3Q8NGS6 347 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TFB2MQ9H5Q4 396 aaKnown RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 TUBD1Q9UJT1 453 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 RGS5O15539 181 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 NDUFB3O43676 98 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 CTNSO60931 367 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 PRLP01236 227 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LINC00032P0C843 101 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 IDO1P14902 403 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 MAP3K8P41279 467 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 BST1Q10588 318 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 OCLNQ16625 522 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LIN52Q52LA3 116 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ACSM3Q53FZ2 586 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 OVCH1Q7RTY7 1134 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 LACC1Q8IV20 430 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 BEST3Q8N1M1 668 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 ZNF676Q8N7Q3 588 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FAM83FQ8NEG4 500 aaPredicted RBP7.85□□□□□ -1.15
HMGB1-203ENST00000341423 OR4S1Q8NGB4 309 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 FNDC8Q8TC99 324 aa7.85□□□□□ -1.15
HMGB1-203ENST00000341423 DOK4Q8TEW6 326 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms