RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 OR4K14Q8NGD5 310 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 MS4A4EQ96PG1 132 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 SERINC2Q96SA4 455 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 TCEAL2Q9H3H9 227 aaPredicted RBP18.78■□□□□ 0.6
SPG7-202ENST00000341316 SNTG1Q9NSN8 517 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 SLC13A4Q9UKG4 626 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 GPR52Q9Y2T5 361 aa18.78■□□□□ 0.6
SPG7-202ENST00000341316 APOL3O95236 402 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 AZGP1P25311 298 aaKnown RBP18.77■□□□□ 0.6
SPG7-202ENST00000341316 CRYBB2P43320 205 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TGM4P49221 684 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 SUZ12Q15022 739 aaKnown RBP18.77■□□□□ 0.6
SPG7-202ENST00000341316 TRAM2Q15035 370 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 SNAPC1Q16533 368 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 DUSP5Q16690 384 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TRMT12Q53H54 448 aaKnown RBP18.77■□□□□ 0.6
SPG7-202ENST00000341316 CDC73Q6P1J9 531 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 ZNF730Q6ZMV8 503 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 Q6ZSR6 202 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 OR2L13Q8N349 312 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 SAP130Q9H0E3 1048 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TPK1Q9H3S4 243 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 CALML5Q9NZT1 146 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 CARD8Q9Y2G2 431 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 N6AMT1Q9Y5N5 214 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 GON4LQ3T8J9 2241 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TNFRSF10CO14798 259 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 RGS13O14921 159 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 IDH3BO43837 385 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 GSTM3P21266 225 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 PRKAR1BP31321 381 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 ETV5P41161 510 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 OMPP47874 163 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 ETV1P50549 477 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 SMSP52788 366 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 GPR50Q13585 617 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 FLYWCH1Q4VC44 716 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 CCNJQ5T5M9 372 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TYW3Q6IPR3 259 aaKnown RBP18.77■□□□□ 0.6
SPG7-202ENST00000341316 LAX1Q8IWV1 398 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 GNPDA2Q8TDQ7 276 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 FAM3CQ92520 227 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 MND1Q9BWT6 205 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 PHF11Q9UIL8 331 aa18.77■□□□□ 0.6
SPG7-202ENST00000341316 TCRBV21S2A2A0A5A6 115 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 CCNYL3P0C7X3 344 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 ENDOUP21128 410 aaKnown RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 PTNP21246 168 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 LTBRP36941 435 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 RORCP51449 518 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 BAK1Q16611 211 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 PUS10Q3MIT2 529 aaKnown RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 CLEC12AQ5QGZ9 265 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 TMPRSS11AQ6ZMR5 421 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 SLC22A18ASQ8N1D0 253 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 TMEM52Q8NDY8 209 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 PROKR2Q8NFJ6 384 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 TP53INP1Q96A56 240 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 POLR2J2Q9GZM3 115 aaKnown RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 CLDND1Q9NY35 253 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 SEC14L4Q9UDX3 406 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 SLC22A7Q9Y694 548 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 SCN2AQ99250 2005 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 A6NL46 340 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 H0YGG7 62 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 B3GALT2O43825 422 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 CELA2BP08218 269 aaPredicted RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 ACP2P11117 423 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 GABRG2P18507 467 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 PSMA1P25786 263 aaKnown RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 RFX2P48378 723 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 RGS8P57771 180 aaPredicted RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 ARF3P61204 181 aaPredicted RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 ST3GAL3Q11203 375 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 TSPAN31Q12999 210 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 ZNF79Q15937 498 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 RNLSQ5VYX0 342 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 OR13H1Q8NG92 308 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 SETD6Q8TBK2 473 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 STUB1Q9UNE7 303 aa18.76■□□□□ 0.59
SPG7-202ENST00000341316 DIMT1Q9UNQ2 313 aaKnown RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 ZNF443Q9Y2A4 671 aaPredicted RBP18.76■□□□□ 0.59
SPG7-202ENST00000341316 LDB3O75112 727 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 DRD1P21728 446 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 MRPS21P82921 87 aaKnown RBP18.75■□□□□ 0.59
SPG7-202ENST00000341316 RAB30Q15771 203 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 ARMC4Q5T2S8 1044 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 SLC27A4Q6P1M0 643 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 ZNF517Q6ZMY9 492 aaPredicted RBP18.75■□□□□ 0.59
SPG7-202ENST00000341316 GDF7Q7Z4P5 450 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 MRGPREQ86SM8 312 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 GATAD2AQ86YP4 633 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 TRIM48Q8IWZ4 208 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 OR5T3Q8NGG3 340 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 TEX47Q8TBZ9 253 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 MCHR1Q99705 422 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 GRIP1Q9Y3R0 1128 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 FANCMQ8IYD8 2048 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 LINC00854A0A1B0GVQ3 168 aa18.75■□□□□ 0.59
SPG7-202ENST00000341316 DUXAA6NLW8 204 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms