RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FMO6PO60774 539 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 VIPR2P41587 438 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 FNTBP49356 437 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 PRR5P85299 388 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 YIF1BQ5BJH7 314 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 GRASPQ7Z6J2 395 aaPredicted RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 TBC1D20Q96BZ9 403 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 SEMA4GQ9NTN9 838 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 NPAP1Q9NZP6 1156 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 FLVCR2Q9UPI3 526 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 MRPS23Q9Y3D9 190 aaKnown RBP13.28□□□□□ -0.28
PCDH8-201ENST00000338862 WDR45Q9Y484 360 aa13.28□□□□□ -0.28
PCDH8-201ENST00000338862 LCMT2O60294 686 aaKnown RBP13.27□□□□□ -0.28
PCDH8-201ENST00000338862 SEMA7AO75326 666 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 ARHGDIBP52566 201 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 DEFB103AP81534 67 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 TCEAL5Q5H9L2 206 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 TOR1AIP1Q5JTV8 583 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 LAS2Q8IYD9 372 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 ZNF655Q8N720 491 aaPredicted RBP13.27□□□□□ -0.28
PCDH8-201ENST00000338862 OR4E2Q8NGC2 313 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 ZMYND19Q96E35 227 aaPredicted RBP13.27□□□□□ -0.28
PCDH8-201ENST00000338862 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 TMEM5Q9Y2B1 443 aa13.27□□□□□ -0.28
PCDH8-201ENST00000338862 GPR55Q9Y2T6 319 aaPredicted RBP13.27□□□□□ -0.28
PCDH8-201ENST00000338862 FXYD6-FXYD2A0A087WZ82 144 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 FAM86C2PA6NEL3 165 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 UBXN7O94888 489 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 CTSLP07711 333 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 CHRM4P08173 479 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 CLUP10909 449 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 SYN1P17600 705 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 ENDOUP21128 410 aaKnown RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 NT5EP21589 574 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 PRLHRP49683 370 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 SNRPGP62308 76 aaKnown RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 SF3A2Q15428 464 aaKnown RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 GXYLT1Q4G148 440 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 ADGRF3Q8IZF5 1079 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 CLDN22Q8N7P3 220 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 FBXO15Q8NCQ5 510 aaPredicted RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 VN1R2Q8NFZ6 395 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 OR2T33Q8NG76 320 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 NXF2Q9GZY0 626 aaKnown RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 FXYD6Q9H0Q3 95 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 OR51J1Q9H342 316 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 METTL17Q9H7H0 456 aaPredicted RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 RFPL3O75679 317 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 GSTM3P21266 225 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 BTN1A1Q13410 526 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 FRRS1Q6ZNA5 592 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 PLA2G15Q8NCC3 412 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 OR4C6Q8NH72 309 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 POLDIP3Q9BY77 421 aaKnown RBP13.27□□□□□ -0.29
PCDH8-201ENST00000338862 GNG8Q9UK08 70 aa13.27□□□□□ -0.29
PCDH8-201ENST00000338862 HTTP42858 3142 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 LOC100509620A0A075B734 347 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 NRG2O14511 850 aaPredicted RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 CSN2P05814 226 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 ACADMP11310 421 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 GABRA5P31644 462 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 RAB40BQ12829 278 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 ENTPD8Q5MY95 495 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 SIGIRRQ6IA17 410 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 COMTD1Q86VU5 262 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 PLCZ1Q86YW0 608 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 ARL14Q8N4G2 192 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 C1orf216Q8TAB5 229 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 NEURL3Q96EH8 262 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 TTYH1Q9H313 450 aaPredicted RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 MRPS30Q9NP92 439 aaKnown RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 TRIM36Q9NQ86 728 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 SLC23A2Q9UGH3 650 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 A4GNTQ9UNA3 340 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 BACE2Q9Y5Z0 518 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 CACNG2Q9Y698 323 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 M0R233 179 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 STX11O75558 287 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 ALDOBP05062 364 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 EIF4EP06730 217 aaKnown RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 LIMS3P0CW19 117 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 LIMS4P0CW20 117 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
PCDH8-201ENST00000338862 DEFB134Q4QY38 66 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 TOR2AQ5JU69 321 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 OTPQ5XKR4 325 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 PARGQ86W56 976 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
PCDH8-201ENST00000338862 TMEM99Q8N816 258 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms