RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TBPL2Q6SJ96 375 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TMPRSS12Q86WS5 348 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CLIP4Q8N3C7 705 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 APCDD1LQ8NCL9 501 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CT55Q8WUE5 264 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DNAJC9Q8WXX5 260 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 WWTR1Q9GZV5 400 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF223Q9UK11 482 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CHST2Q9Y4C5 530 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 MAGED1Q9Y5V3 778 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF292O60281 2723 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PTPRBP23467 1997 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CDC14CA4D256 554 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CLDN24A6NM45 220 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 G3V2T6 193 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 UGT2B17O75795 530 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DBIP07108 87 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DRD5P21918 477 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RPS4Y1P22090 263 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RRM2P31350 389 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FOLR3P41439 243 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RNF144AP50876 292 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NR0B1P51843 470 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PPP4R4Q6NUP7 873 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DHRS4L2Q6PKH6 230 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DEF8Q6ZN54 512 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HS3ST5Q8IZT8 346 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR5K1Q8NHB7 308 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PMM1Q92871 262 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EFHD2Q96C19 240 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 G6PC3Q9BUM1 346 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SEMA4CQ9C0C4 833 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 VCXQ9H320 206 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RLIMQ9NVW2 624 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SLC13A4Q9UKG4 626 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PPIEQ9UNP9 301 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SLC9A8Q9Y2E8 581 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FAM32AQ9Y421 112 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TESMINQ9Y4I5 508 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LRRC42Q9Y546 428 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LOC102723996A0A087X1L8 192 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SYT5O00445 386 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FRS3O43559 492 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 THBS1P07996 1170 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GUSBP08236 651 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CD63P08962 238 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DCTP40126 519 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DCAF7P61962 342 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RPS18P62269 152 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RNF4P78317 190 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DECR1Q16698 335 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OTUD3Q5T2D3 398 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SWT1Q5T5J6 900 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HSDL2Q6YN16 418 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 STK32CQ86UX6 486 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZDHHC13Q8IUH4 622 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CACTIN-AS1Q8N1I8 211 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ESX1Q8N693 406 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 VMP1Q96GC9 406 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 REEP1Q9H902 201 aa13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LIN28AQ9H9Z2 209 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FAM186AA6NE01 2351 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EI24O14681 340 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DNAJB5O75953 348 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RASAL1O95294 804 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RHCEP18577 417 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SLC26A5P58743 744 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 EEF1A1P68104 462 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SPIBQ01892 262 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LAPTM4AQ15012 233 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PCOLCEQ15113 449 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LIN52Q52LA3 116 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TCTN3Q6NUS6 607 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SVOPLQ8N434 492 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ZNF614Q8N883 585 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR6T1Q8NGN1 323 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PIP5K1AQ99755 562 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ARHGDIGQ99819 225 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 KLHL28Q9NXS3 571 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RHCGQ9UBD6 479 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TCFL5Q9UL49 500 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DMXL1Q9Y485 3027 aa13.62□□□□□ -0.23
CDK5RAP3-201ENST00000338399 TRBV11-1A0A0K0K1C0 115 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 ADAMDEC1O15204 470 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DPM1O60762 260 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 SEMA7AO75326 666 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 RAB40ALP0C0E4 278 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NID1P14543 1247 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PRKACGP22612 351 aa13.61□□□□□ -0.23
CDK5RAP3-201ENST00000338399 DNAJA1P31689 397 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms