RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RGS6P49758 472 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TSPAN31Q12999 210 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TBCEQ15813 527 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C1orf189Q5VU69 101 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NUP54Q7Z3B4 507 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF619Q8N2I2 560 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SLC44A3Q8N4M1 653 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TMEM156Q8N614 296 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR52R1Q8NGF1 315 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 FNDC8Q8TC99 324 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CREB3L4Q8TEY5 395 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR51E2Q9H255 320 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 LTB4R2Q9NPC1 389 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SERINC1Q9NRX5 453 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 EXTL2Q9UBQ6 330 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 WDR37Q9Y2I8 494 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 UBE2QL1A1L167 161 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GKN3PP0CG01 181 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GIMD1P0DJR0 217 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 WNT4P56705 351 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GPR18Q14330 331 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GPR19Q15760 415 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ANKRD34AQ69YU3 496 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SLC15A4Q8N697 577 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZFP41Q8N8Y5 198 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SFXN5Q8TD22 340 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NEURL3Q96EH8 262 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SPHK1Q9NYA1 384 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 MRPL39Q9NYK5 338 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SPATA2Q9UM82 520 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ARID2Q68CP9 1835 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF879B4DU55 563 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C9J4A7 227 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SSNA1O43805 119 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PDX1P52945 283 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CSTF1Q05048 431 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PLCXD2Q0VAA5 305 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZCCHC12Q6PEW1 402 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CPOQ8IVL8 374 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF440Q8IYI8 595 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR13F1Q8NGS4 319 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PATE1Q8WXA2 126 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SMPDL3BQ92485 455 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 RPP25Q9BUL9 199 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 GTPBP2Q9BX10 602 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C6orf106Q9H6K1 298 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NTN4Q9HB63 628 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SDHAF3Q9NRP4 125 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CENPMQ9NSP4 180 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CMAHPQ9Y471 501 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 DUX1O43812 170 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SLITRK5O94991 958 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 BSGP35613 385 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TPMTP51580 245 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NSDHLQ15738 373 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF791Q3KP31 576 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ANKDD1AQ495B1 522 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 MSRB3Q8IXL7 192 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 FANK1Q8TC84 345 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TEX101Q9BY14 249 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TTTY10Q9BZA0 68 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR52D1Q9H346 318 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TNS1Q9HBL0 1735 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 KCNE1BA0A087WTH5 132 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TRIM3O75382 744 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 KRT33AO76009 404 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 TFPTP0C1Z6 253 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF91Q05481 1191 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 RAB40BQ12829 278 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 EXOSC7Q15024 291 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZFP69Q49AA0 526 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PRSS36Q5K4E3 855 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ENTPD8Q5MY95 495 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 MEX3DQ86XN8 651 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PTOV1Q86YD1 416 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 OR6T1Q8NGN1 323 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 RNF31Q96EP0 1072 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SLC22A4Q9H015 551 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NANSQ9NR45 359 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 CNOT2Q9NZN8 540 aaKnown RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C2orf92A0A1B0GVN3 265 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C11orf98E9PRG8 122 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 AQP9O43315 295 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 MAP4K2Q12851 820 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 LTB4RQ15722 352 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 UNQ6126/PRO20091Q6UXV3 157 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 NEIL3Q8TAT5 605 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 SP7Q8TDD2 431 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 KLRF1Q9NZS2 232 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PARP14Q460N5 1801 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 LRIT2A6NDA9 550 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ARFIP1P53367 373 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 PLAG1Q6DJT9 500 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ENTHD1Q8IYW4 607 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 EFHD2Q96C19 240 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-202ENST00000338368 ZNF304Q9HCX3 659 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 THSD1Q9NS62 852 aa5.91□□□□□ -1.46
PRKDC-202ENST00000338368 C19orf25Q9UFG5 118 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms