RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 GATA5Q9BWX5 397 aaPredicted RBP16.07■□□□□ 0.16
CMTM1-204ENST00000336328 TBL1XR1Q9BZK7 514 aa16.07■□□□□ 0.16
CMTM1-204ENST00000336328 ACSS1Q9NUB1 689 aaPredicted RBP16.07■□□□□ 0.16
CMTM1-204ENST00000336328 MKS1Q9NXB0 559 aa16.07■□□□□ 0.16
CMTM1-204ENST00000336328 SH3BP4Q9P0V3 963 aa16.07■□□□□ 0.16
CMTM1-204ENST00000336328 NDRG3Q9UGV2 375 aa16.07■□□□□ 0.16
CMTM1-204ENST00000336328 RPH3AQ9Y2J0 694 aaPredicted RBP16.07■□□□□ 0.16
CMTM1-204ENST00000336328 TMEM114B3SHH9 223 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 CASKO14936 926 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 NPHS1O60500 1241 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 MAPK1P28482 360 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 RPL3P39023 403 aaKnown RBP16.06■□□□□ 0.16
CMTM1-204ENST00000336328 PCYT1AP49585 367 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 OCRLQ01968 901 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 HSPB3Q12988 150 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 ZCCHC12Q6PEW1 402 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 CDC20BQ86Y33 519 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 CDRT4Q8N9R6 151 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 FCRL1Q96LA6 429 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 YIPF4Q9BSR8 244 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 ROPN1BQ9BZX4 212 aaPredicted RBP16.06■□□□□ 0.16
CMTM1-204ENST00000336328 ROPN1Q9HAT0 212 aaPredicted RBP16.06■□□□□ 0.16
CMTM1-204ENST00000336328 MED11Q9P086 117 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 CLCF1Q9UBD9 225 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 ST6GALNAC2Q9UJ37 374 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 PACSIN3Q9UKS6 424 aa16.06■□□□□ 0.16
CMTM1-204ENST00000336328 C2CD3Q4AC94 2353 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 MSTNO14793 375 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 HCRTR2O43614 444 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 SOX30O94993 753 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 LINC00032P0C843 101 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 LCN1P31025 176 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 RFX3P48380 749 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 RPS3AP61247 264 aaKnown RBP16.05■□□□□ 0.16
CMTM1-204ENST00000336328 PRR5P85299 388 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 IFFO1Q0D2I5 559 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 FOXF2Q12947 444 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 FGFBP1Q14512 234 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 PCLAFQ15004 111 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 RAET1LQ5VY80 246 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 ZNF551Q7Z340 670 aaPredicted RBP16.05■□□□□ 0.16
CMTM1-204ENST00000336328 NATD1Q8N6N6 113 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 NUP43Q8NFH3 380 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 OR6Y1Q8NGX8 325 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 LINC01560Q8TB33 94 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 GFM2Q969S9 779 aaKnown RBP16.05■□□□□ 0.16
CMTM1-204ENST00000336328 APOPT1Q96IL0 206 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 C12orf65Q9H3J6 166 aaKnown RBP16.05■□□□□ 0.16
CMTM1-204ENST00000336328 TNFRSF12AQ9NP84 129 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 NTMQ9P121 344 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 FIS1Q9Y3D6 152 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 TRAF6Q9Y4K3 522 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 DNAJC15Q9Y5T4 150 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 KIAA1549Q9HCM3 1950 aa16.05■□□□□ 0.16
CMTM1-204ENST00000336328 SLC22A20A6NK97 555 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 A8MXE2 369 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 EMC8O43402 210 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 AKAP10O43572 662 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 NKX2-2O95096 273 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 UTS2O95399 124 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 HSPA4LO95757 839 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 SERPINB5P36952 375 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 PRKAG1P54619 331 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 B3GALT5-AS1P59052 145 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 RFTN2Q52LD8 501 aaPredicted RBP16.04■□□□□ 0.16
CMTM1-204ENST00000336328 KANK2Q63ZY3 851 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 LUZP2Q86TE4 346 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 MARCH3Q86UD3 253 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 DDIASQ8IXT1 998 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 BANPQ8N9N5 519 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 TSSK3Q96PN8 268 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 G6PC3Q9BUM1 346 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 CCM2LQ9NUG4 571 aaPredicted RBP16.04■□□□□ 0.16
CMTM1-204ENST00000336328 ZNF337Q9Y3M9 751 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 AP4B1Q9Y6B7 739 aa16.04■□□□□ 0.16
CMTM1-204ENST00000336328 PCNX3Q9H6A9 2034 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 A0A087WZY1 265 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 IGLV3-32A0A0A0MS00 114 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 LSM1O15116 133 aaKnown RBP16.03■□□□□ 0.16
CMTM1-204ENST00000336328 ANGPTL1O95841 491 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 NGFRP08138 427 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 NUDT17P0C025 328 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 HPGDP15428 266 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 SDC1P18827 310 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 TCEA1P23193 301 aaKnown RBP16.03■□□□□ 0.16
CMTM1-204ENST00000336328 ALDH3A1P30838 453 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 FRKP42685 505 aaPredicted RBP16.03■□□□□ 0.16
CMTM1-204ENST00000336328 SERPINB4P48594 390 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 PRIM2P49643 509 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 RPL38P63173 70 aaKnown RBP16.03■□□□□ 0.16
CMTM1-204ENST00000336328 STX5Q13190 355 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 MLC1Q15049 377 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
CMTM1-204ENST00000336328 UBQLNLQ8IYU4 475 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms