RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PROS1P07225 676 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SMIM10L1P0DMW3 83 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 S100A1P23297 94 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 GABARAPL2P60520 117 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 TIGD6Q17RP2 521 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 C1orf189Q5VU69 101 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF836Q6ZNA1 936 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 VASH1Q7L8A9 365 aaPredicted RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 P2RY8Q86VZ1 359 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SLC34A3Q8N130 599 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 LINC00469Q8N7U9 141 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 OR8D4Q8NGM9 314 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 NT5CQ8TCD5 201 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 SMIM10Q96HG1 83 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 B3GNT4Q9C0J1 378 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ANKHQ9HCJ1 492 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 ATP13A2Q9NQ11 1180 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 KCND3Q9UK17 655 aa11.73□□□□□ -0.53
LIMK1-201ENST00000336180 RBMX2Q9Y388 322 aaKnown RBP11.73□□□□□ -0.53
LIMK1-201ENST00000336180 NADKO95544 446 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 GNSP15586 552 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 JUNBP17275 347 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ITIH1P19827 911 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 TMED10P49755 219 aaKnown RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 TYW3Q6IPR3 259 aaKnown RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 BHLHB9Q6PI77 547 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 HSDL2Q6YN16 418 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 PFN4Q8NHR9 129 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 BBS10Q8TAM1 723 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 HLA-CQ95604 372 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 TMEM203Q969S6 136 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 MS4A4EQ96PG1 132 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 PHF11Q9UIL8 331 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ENPP5Q9UJA9 477 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ARID1BQ8NFD5 2236 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 A0A1B0GVT2 93 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 CDC14CA4D256 554 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ZAR1LA6NP61 321 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 CLCA1A8K7I4 914 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 M0R3G1 203 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 OSMP13725 252 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 OPRL1P41146 370 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 CLK1P49759 484 aaKnown RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 BMXP51813 675 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 NUP107P57740 925 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 STX4Q12846 297 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 DUSP8Q13202 625 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 INAVAQ3KP66 663 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 GXYLT1Q4G148 440 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 CASP12Q6UXS9 341 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF321PQ8N8H1 164 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 SDF2Q99470 211 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
LIMK1-201ENST00000336180 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
LIMK1-201ENST00000336180 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 TNFSF14O43557 240 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ADORA3P0DMS8 318 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 GABRB1P18505 474 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 TGM4P49221 684 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 HMGA2P52926 109 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ATP1A4Q13733 1029 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 MLC1Q15049 377 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 SNAPC1Q16533 368 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 MINDY4Q4G0A6 757 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.53
LIMK1-201ENST00000336180 TTLL10Q6ZVT0 673 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF675Q8TD23 568 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ANKRD9Q96BM1 317 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-201ENST00000336180 SARGQ9BW04 601 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ENKD1Q9H0I2 346 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 MED20Q9H944 212 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 NLGN3Q9NZ94 848 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 POMT2Q9UKY4 750 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF443Q9Y2A4 671 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-201ENST00000336180 GPR179Q6PRD1 2367 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 URADA6NGE7 173 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 GPR75O95800 540 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 EMP3P54852 163 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 FAM53BQ14153 422 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 TSTQ16762 297 aaKnown RBP11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ZNF628Q5EBL2 1059 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 ARMCX4Q5H9R4 360 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 PERM1Q5SV97 790 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 DCST2Q5T1A1 773 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 RAB2BQ8WUD1 216 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-201ENST00000336180 CLCA3PQ9Y6N3 262 aa11.71□□□□□ -0.53
LIMK1-201ENST00000336180 A0A0G2JPF8 293 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 METTL12A8MUP2 240 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 HNRNPCL2B2RXH8 293 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 HNRNPCL3B7ZW38 293 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 LRRN3E7EW58 273 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 CDC42EP2O14613 210 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms