RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SLC35A4Q96G79 324 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SENP5Q96HI0 755 aaPredicted RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 NIPAL2Q9H841 368 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 PHPT1Q9NRX4 125 aaPredicted RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 PCOLCE2Q9UKZ9 415 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TRPM6Q9BX84 2022 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 A0A1B0GTQ1 180 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 GABRPO00591 440 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 ERI3O43414 337 aaKnown RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SLC43A1O75387 559 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TCEA1P23193 301 aaKnown RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 CD79BP40259 229 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 IKZF1Q13422 519 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SF3A2Q15428 464 aaKnown RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TRAM1Q15629 374 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 CST6Q15828 149 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 RPE65Q16518 533 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 TBRG1Q3YBR2 411 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 CRTC2Q53ET0 693 aaPredicted RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 RPL13AP3Q6NVV1 102 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 VRK2Q86Y07 508 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SLC7A5P1Q8MH63 180 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 FBXL6Q8N531 539 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 ASCC1Q8N9N2 400 aaKnown RBP12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SLC41A3Q96GZ6 507 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 GDE1Q9NZC3 331 aa12.49□□□□□ -0.41
RC3H2-201ENST00000335387 SHISA3A0PJX4 238 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 WASHC1A8K0Z3 465 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CENPXA8MT69 81 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 BHLHE40O14503 412 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 PRKRAO75569 313 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ALAS2P22557 587 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CARTPTQ16568 116 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 FAM214AQ32MH5 1076 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 PDZK1Q5T2W1 519 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 C18orf63Q68DL7 685 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CAPSLQ8WWF8 208 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 KISS1RQ969F8 398 aaPredicted RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 FAM46AQ96IP4 442 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZNF350Q9GZX5 532 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 OR6C2Q9NZP2 312 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 YES1P07947 543 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 TBXA2RP21731 343 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 IFNA8P32881 189 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 MC3RP41968 323 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 RPS15AP62244 130 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 TNFRSF17Q02223 184 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 MZT2AQ6P582 158 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 VN1R4Q7Z5H5 301 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CCDC116Q8IYX3 515 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 SYT14Q8NB59 555 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 OR2T33Q8NG76 320 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 TM9SF2Q99805 663 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 KRCC1Q9NPI7 259 aaPredicted RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ACOXLQ9NUZ1 547 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 KLHL28Q9NXS3 571 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 HAO2Q9NYQ3 351 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 PLRG1O43660 514 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CD1AP06126 327 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZGLP1P0C6A0 271 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 GNSP15586 552 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 HK1P19367 917 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CERS1P27544 350 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CMPK1P30085 196 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 MAP2K3P46734 347 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 RFX3P48380 749 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CTBP2P56545 445 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 NIPAL3Q6P499 406 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 USP53Q70EK8 1073 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 NKAIN4Q8IVV8 208 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 LNX2Q8N448 690 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
RC3H2-201ENST00000335387 RSC1A1Q92681 617 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 PRM3Q9NNZ6 103 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 POLE3Q9NRF9 147 aa12.48□□□□□ -0.41
RC3H2-201ENST00000335387 A0A087WV62 115 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 NDUFV2P19404 249 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 SLC2A5P22732 501 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 PDX1P52945 283 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 BTG1P62324 171 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 SMARCD3Q6STE5 483 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 ZNF836Q6ZNA1 936 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 TMPRSS11FQ6ZWK6 438 aa12.47□□□□□ -0.41
RC3H2-201ENST00000335387 PXKQ7Z7A4 578 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms