RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NMNAT2Q9BZQ4 307 aa9.31□□□□□ -0.92
COL4A6-201ENST00000334504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.31□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF541Q9H0D2 1346 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 FAM171A2A8MVW0 826 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 FABP7O15540 132 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 CLN5O75503 358 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 MGST1P10620 155 aaKnown RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 IL20RBQ6UXL0 311 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ZDHHC14Q8IZN3 488 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 METTL27Q8N6F8 245 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 C2orf15Q8WU43 125 aaKnown RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 LRRC46Q96FV0 321 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF559Q9BR84 538 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 OR8D2Q9GZM6 311 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 GPRC5BQ9NZH0 403 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RASD1Q9Y272 281 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF860A6NHJ4 632 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SCO2O43819 266 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SYPP08247 313 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM225BP0DP42 221 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 PTPN2P17706 415 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 GGT2P36268 569 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 CLDN8P56748 225 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RAP2BP61225 183 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TLE1Q04724 770 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 PLP2Q04941 152 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 COL9A2Q14055 689 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 MLC1Q15049 377 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 LPAL2Q16609 132 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 C18orf21Q32NC0 220 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TECPR1Q7Z6L1 1165 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 CD163Q86VB7 1156 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM156Q8N614 296 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TMPRSS11EQ9UL52 423 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 FAM227AF5H4B4 570 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 C1GALT1C1LP0DN25 315 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 NKX3-2P78367 333 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 HMGN3Q15651 99 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 DUSP6Q16828 381 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TTLL10Q6ZVT0 673 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 OR51L1Q8NGJ5 315 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 OR2A12Q8NGT7 310 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 DOK4Q8TEW6 326 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 C2CD4CQ8TF44 421 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM19Q96HH6 336 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 HHIPL1Q96JK4 782 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TXN2Q99757 166 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 PRRT1Q99946 306 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RNF32Q9H0A6 362 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 LIPT1Q9Y234 373 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 DNAJC15Q9Y5T4 150 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 COL3A1P02461 1466 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 CTDSP2O14595 271 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SRPX2O60687 465 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 TNFP01375 233 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RPL23AP62750 156 aaKnown RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF691Q5VV52 312 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-201ENST00000334504 KCNIP1Q9NZI2 227 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 CBY3A6NI87 242 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 E7ESA3 106 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SYT7O43581 403 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SEC14L2O76054 403 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 MPIG6BO95866 241 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ITGAMP11215 1152 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 THBS2P35442 1172 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 BLKP51451 505 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 SH3BP2P78314 561 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 INAVAQ3KP66 663 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 GTDC1Q4AE62 458 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 DTWD1Q8N5C7 304 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RNF128Q8TEB7 428 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 PTGES2Q9H7Z7 377 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 AGPAT4Q9NRZ5 378 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 RHBDD3Q9Y3P4 386 aa9.3□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF30P17039 623 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HOXC8P31273 242 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 RAB31Q13636 194 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NNATQ16517 81 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 UNQ6126/PRO20091Q6UXV3 157 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 CPOQ8IVL8 374 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 KDM8Q8N371 416 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM125Q96AQ2 219 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 ACKR4Q9NPB9 350 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 SAGE1Q9NXZ1 904 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 MRPS17Q9Y2R5 130 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HCRTO43612 131 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 RDH16O75452 317 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 HLA-AP01891 365 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 INHAP05111 366 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 C6P13671 934 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 NME2P22392 152 aa9.29□□□□□ -0.92
COL4A6-201ENST00000334504 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
COL4A6-201ENST00000334504 MEF2DQ14814 521 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms