RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 ADPRMQ3LIE5 342 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 GRHL2Q6ISB3 625 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 GTF2H2CQ6P1K8 395 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 BEND4Q6ZU67 534 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 GSPT2Q8IYD1 628 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 STEAP2Q8NFT2 490 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 PHF21BQ96EK2 531 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 CMTM7Q96FZ5 175 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 MAPKAP1Q9BPZ7 522 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 RBM4Q9BWF3 364 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 IPPKQ9H8X2 491 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 ZNF490Q9ULM2 529 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 EMC9Q9Y3B6 208 aa13.16□□□□□ -0.3
CTHRC1-201ENST00000330295 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 DPRXA6NFQ7 191 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 SHISA9B4DS77 424 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 CLDN9O95484 217 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 PEPDP12955 493 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 KRT15P19012 456 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 ADH6P28332 368 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 PIK3CBP42338 1070 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 NR4A2P43354 598 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 CCNG1P51959 295 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 EEFSECP57772 596 aaKnown RBP13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 LGALS3BPQ08380 585 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 BIKQ13323 160 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 SNTA1Q13424 505 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 PON3Q15166 354 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 AP5B1Q2VPB7 878 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 GOLGA7Q7Z5G4 137 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 PEG10Q86TG7 708 aaKnown RBP13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 LAS2Q8IYD9 372 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 SOX7Q9BT81 388 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 KLRF1Q9NZS2 232 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 DCDC2Q9UHG0 476 aa13.15□□□□□ -0.3
CTHRC1-201ENST00000330295 H0YC42 278 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 H7C417 338 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TUBBP07437 444 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ALOX15P16050 662 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 EPORP19235 508 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TCEA1P23193 301 aaKnown RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 PTX3P26022 381 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ABCD3P28288 659 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TTKP33981 857 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 NEK2P51955 445 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 EFNA4P52798 201 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TPD52P55327 224 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 IFFO1Q0D2I5 559 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 E2F2Q14209 437 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TAB1Q15750 504 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 DESI1Q6ICB0 168 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ZNF619Q8N2I2 560 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 NODALQ96S42 347 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 PIMREGQ9BSJ6 248 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
CTHRC1-201ENST00000330295 H0YIV9 168 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 PRAMEF4O60810 478 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 RGS9O75916 674 aaPredicted RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 LY6HO94772 140 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 AQP8O94778 261 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 OTCP00480 354 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 FCGR2AP12318 317 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 CD22P20273 847 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 IL11P20809 199 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 GCAP28676 217 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 CCT5P48643 541 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 SUCLG1P53597 346 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 IFT88Q13099 833 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 DDX39BQ13838 428 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 RASA2Q15283 850 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 CPSF6Q16630 551 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 PRAMEF9Q5VWM5 478 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 KHDRBS2Q5VWX1 349 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 STK32CQ86UX6 486 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 PLCZ1Q86YW0 608 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 SLC22A9Q8IVM8 553 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 RIT1Q92963 219 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms