RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PAQR3Q6TCH7 311 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 NHLRC1Q6VVB1 395 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TSPAN33Q86UF1 283 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SLC44A3Q8N4M1 653 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 C1orf52Q8N6N3 182 aaKnown RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 RTL3Q8N8U3 475 aaKnown RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 OR52J3Q8NH60 311 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 RPLP0P6Q8NHW5 317 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 POC1BQ8TC44 478 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM40Q8WWA1 233 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 GCDHQ92947 438 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CPPED1Q9BRF8 314 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 POLR1EQ9GZS1 481 aaKnown RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TLNRD1Q9H1K6 362 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 GALPQ9UBC7 116 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4Q9UBX2 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 ZMIZ1Q9ULJ6 1067 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 Q9Y3F1 56 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 FXYD6-FXYD2A0A087WZ82 144 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 A0A087X0M5 115 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 A0A1B0GX30 115 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SHISA3A0PJX4 238 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 HHLA1C9JL84 531 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 PRR23D1E9PI22 279 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 IGHV2-5P01817 119 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 MT-ND4P03905 459 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 HEXAP06865 529 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 MMP2P08253 660 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 PRR23D2P0DMB1 279 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CD86P42081 329 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 AGTR2P50052 363 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CDH4P55283 916 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 ERVPABLB-1P60509 514 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 NUTF2P61970 127 aaKnown RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 BLOC1S1P78537 153 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SLC14A1Q13336 389 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 ARTNQ5T4W7 220 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 KIAA1211LQ6NV74 962 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 OR10G2Q8NGC3 310 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CHTF18Q8WVB6 975 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 EDEM1Q92611 657 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TPD52L3Q96J77 140 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CDK15Q96Q40 435 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 EPYCQ99645 322 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 PIGQQ9BRB3 760 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TOLLIPQ9H0E2 274 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 METTL9Q9H1A3 318 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SEMA6CQ9H3T2 930 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 ACSS1Q9NUB1 689 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 GFOD1Q9NXC2 390 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TEX10Q9NXF1 929 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DNAJC27Q9NZQ0 273 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 MED16Q9Y2X0 877 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 MMACHCQ9Y4U1 282 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 PSMD9O00233 223 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CCL22O00626 93 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 OR2T1O43869 369 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 KRT33AO76009 404 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 B3GALT4O96024 378 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CNR1P21554 472 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CD96P40200 585 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 HTR6P50406 440 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
SHMT2-201ENST00000328923 E2F1Q01094 437 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 FABP5Q01469 135 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 ABHD18Q0P651 414 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 PLA2G7Q13093 441 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 USF2Q15853 346 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-201ENST00000328923 KCNA10Q16322 511 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 LIPNQ5VXI9 398 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 MTFR2Q6P444 385 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 IL27RAQ6UWB1 636 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 IL20RBQ6UXL0 311 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 OR4Q3Q8NH05 313 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 OR4L1Q8NH43 312 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 PIGKQ92643 395 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 ESAMQ96AP7 390 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 NAA11Q9BSU3 229 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-201ENST00000328923 NXF3Q9H4D5 531 aaKnown RBP11.13□□□□□ -0.63
SHMT2-201ENST00000328923 SUV39H2Q9H5I1 410 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CLMPQ9H6B4 373 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 TP53TG5Q9Y2B4 290 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 NPEPPSL1A6NEC2 478 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 IRAK2O43187 625 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 FGF19O95750 216 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 IFNGP01579 166 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CD3GP09693 182 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 PIPP12273 146 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-201ENST00000328923 PEPDP12955 493 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 ELNP15502 786 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CPEP16870 476 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 CDC42P60953 191 aa11.13□□□□□ -0.63
SHMT2-201ENST00000328923 ILF3Q12906 894 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms