RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 POU2F3Q9UKI9 436 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF451Q9Y4E5 1061 aa11.88□□□□□ -0.51
DDX39A-202ENST00000324340 SCN2AQ99250 2005 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CCDC187A0A096LP49 1063 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 OR2W5A6NFC9 320 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 TM4SF5O14894 197 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-202ENST00000324340 PRSS23O95084 383 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SNX4O95219 450 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CYC1P08574 325 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 ZGLP1P0C6A0 271 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 ZNF28P17035 718 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 AGXTP21549 392 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CRHBPP24387 322 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 KDELR2P33947 212 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SOX11P35716 441 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MAP3K8P41279 467 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 PRIM2P49643 509 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 PRKAG1P54619 331 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MLLT10P55197 1068 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CDK6Q00534 326 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 FUT7Q11130 342 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SCARB2Q14108 478 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 LASP1Q14847 261 aaKnown RBP11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MAPK11Q15759 364 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CCDC157Q569K6 752 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 DCAF12Q5T6F0 453 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MFSD12Q6NUT3 480 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 CDC73Q6P1J9 531 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MRPL14Q6P1L8 145 aaKnown RBP11.87□□□□□ -0.51
DDX39A-202ENST00000324340 TNFAIP8L2Q6P589 184 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-202ENST00000324340 DHRS13Q6UX07 377 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 RAB11FIP2Q7L804 512 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 EID3Q8N140 333 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 VWA5B2Q8N398 1253 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 DEFB124Q8NES8 71 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 STT3BQ8TCJ2 826 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 PMEPA1Q969W9 287 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 FUNDC2Q9BWH2 189 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 ACTRT3Q9BYD9 372 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 VN1R1Q9GZP7 353 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 TP63Q9H3D4 680 aaPredicted RBP11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SLA2Q9H6Q3 261 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 WDR54Q9H977 334 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 ANKRA2Q9H9E1 313 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SIAEQ9HAT2 523 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 NEK6Q9HC98 313 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 MYO15AQ9UKN7 3530 aa11.87□□□□□ -0.51
DDX39A-202ENST00000324340 DMDP11532 3685 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 DUXAA6NLW8 204 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 FAM25AB3EWG3 89 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 FAM25CB3EWG5 89 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 FAM25GB3EWG6 89 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 SNPHO15079 494 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 UPK1BO75841 260 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CBX7O95931 251 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 KRT8P05787 483 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CCDC159P0C7I6 412 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 ENDOUP21128 410 aaKnown RBP11.86□□□□□ -0.51
DDX39A-202ENST00000324340 ETV5P41161 510 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 ALDH3A2P51648 485 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CRYBA2P53672 197 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CD300CQ08708 224 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 DUSP8Q13202 625 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 ELOAQ14241 798 aaKnown RBP11.86□□□□□ -0.51
DDX39A-202ENST00000324340 NKG7Q16617 165 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CTF1Q16619 201 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 MINDY4Q4G0A6 757 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 CRB2Q5IJ48 1285 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 HES3Q5TGS1 186 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 SZRD1Q7Z422 152 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 C8orf59Q8N0T1 100 aaPredicted RBP11.86□□□□□ -0.51
DDX39A-202ENST00000324340 SLC38A5Q8WUX1 472 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 FAM162AQ96A26 154 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 C16orf58Q96GQ5 468 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 OR7D2Q96RA2 312 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 MARCH7Q9H992 704 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 P2RX2Q9UBL9 471 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 OAZ3Q9UMX2 235 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 ANGPT4Q9Y264 503 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 PCDHGA8Q9Y5G5 932 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 PCDHGA3Q9Y5H0 932 aa11.86□□□□□ -0.51
DDX39A-202ENST00000324340 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PRAMEF27A3QJZ7 478 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 M0R3G1 203 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 EI24O14681 340 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 PLD2O14939 933 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 MAN1A2O60476 641 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SOX30O94993 753 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 AGR2O95994 175 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 SERPINA1P01009 418 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 KLK3P07288 261 aaPredicted RBP11.85□□□□□ -0.51
DDX39A-202ENST00000324340 FTH1P19P0C7X4 201 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 OR12D1P0DN82 309 aa11.85□□□□□ -0.51
DDX39A-202ENST00000324340 CASP3P42574 277 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms