RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 TRIML2Q8N7C3 387 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 OR5D16Q8NGK9 328 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 RFWD2Q8NHY2 731 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 HOXB13Q92826 284 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-201ENST00000320936 OR7D2Q96RA2 312 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 SLC35A5Q9BS91 424 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 G6PC3Q9BUM1 346 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 PIGUQ9H490 435 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 QPCTLQ9NXS2 382 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 SUCOQ9UBS9 1254 aaKnown RBP17.09■□□□□ 0.33
CIRBP-201ENST00000320936 PCDHGB3Q9Y5G1 929 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 COL12A1Q99715 3063 aa17.09■□□□□ 0.33
CIRBP-201ENST00000320936 NPIPA2E9PIF3 369 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 NPIPA3F8WFD2 350 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 SCN2BO60939 215 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 TROVE2P10155 538 aaKnown RBP eCLIP17.08■□□□□ 0.32
CIRBP-201ENST00000320936 ESRRAP11474 423 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-201ENST00000320936 HPGDP15428 266 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 NCF2P19878 526 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-201ENST00000320936 MATN1P21941 496 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 CA7P43166 264 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 LRRC74AQ0VAA2 488 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 FNDC7Q5VTL7 733 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 C3P1Q6ZMU1 363 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 ZNF621Q6ZSS3 439 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 FGD2Q7Z6J4 655 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 OR4K17Q8NGC6 315 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 SSC4DQ8WTU2 575 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 DTNBP1Q96EV8 351 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 SIKE1Q9BRV8 207 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 INPP5KQ9BT40 448 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 RMND5AQ9H871 391 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 SDHAF3Q9NRP4 125 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 PLSCR2Q9NRY7 297 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 FGFR1OP2Q9NVK5 253 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 TNFRSF10DQ9UBN6 386 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 DKKL1Q9UK85 242 aa17.08■□□□□ 0.32
CIRBP-201ENST00000320936 DIDO1Q9BTC0 2240 aaKnown RBP17.08■□□□□ 0.32
CIRBP-201ENST00000320936 C15orf38-AP3S2A0A0A6YYH1 394 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 FAM234BA2RU67 622 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 CCDC154A6NI56 674 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 NR5A2O00482 541 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 RFXANKO14593 260 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 HCN1O60741 890 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 ANP32DO95626 131 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 IGHG3P01860 377 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 GSNP06396 782 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 PTPN6P29350 595 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 KHKP50053 298 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 C6orf10Q5SRN2 563 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 DCST2Q5T1A1 773 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 C16orf62Q7Z3J2 963 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 PLCZ1Q86YW0 608 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 OR5M9Q8NGP3 310 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 FAM57AQ8TBR7 257 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 VPS33AQ96AX1 596 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 GIN1Q9NXP7 522 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 ACAD8Q9UKU7 415 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 ZNF835Q9Y2P0 537 aa17.07■□□□□ 0.32
CIRBP-201ENST00000320936 CLEC18AA5D8T8 446 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 DUXAA6NLW8 204 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 GMFGO60234 142 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 SUSD5O60279 629 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 FADS1O60427 444 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 SOX30O94993 753 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 TCEA1P23193 301 aaKnown RBP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 GCKP35557 465 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 CDKN2CP42773 168 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 SF3A3Q12874 501 aaKnown RBP eCLIP17.06■□□□□ 0.323e-10■■□□□ 13.6
CIRBP-201ENST00000320936 SQLEQ14534 574 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 EXOSC6Q5RKV6 272 aaKnown RBP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 ATAD3BQ5T9A4 648 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 TNFAIP8L2Q6P589 184 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 CLEC18BQ6UXF7 455 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 Q6ZPB1 254 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 ZAR1Q86SH2 424 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 MARCH3Q86UD3 253 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 CHERPQ8IWX8 916 aaKnown RBP17.06■□□□□ 0.32
CIRBP-201ENST00000320936 WDSUB1Q8N9V3 476 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 CLEC18CQ8NCF0 446 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 OR14L1PQ8NHC6 308 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 SARAFQ96BY9 339 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 ITCHQ96J02 903 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 OR51I1Q9H343 314 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 FBXO34Q9NWN3 711 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 TRIM33Q9UPN9 1127 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 DOPEY2Q9Y3R5 2298 aa17.06■□□□□ 0.32
CIRBP-201ENST00000320936 OR14I1A6ND48 311 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 C17orf51A8MQB3 221 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 SCDO00767 359 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 AQP7O14520 342 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 BCKDKO14874 412 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 CBR3O75828 277 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 OXSR1O95747 527 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-201ENST00000320936 HPNP05981 417 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 EIPR1Q53HC9 387 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 WIPI1Q5MNZ9 446 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-201ENST00000320936 SAXO2Q658L1 398 aa17.05■□□□□ 0.32
CIRBP-201ENST00000320936 YRDCQ86U90 279 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms