RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ZNF485Q8NCK3 441 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 OR4D9Q8NGE8 314 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 OR13C5Q8NGS8 318 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 WDR89Q96FK6 387 aaPredicted RBP9.06□□□□□ -0.96
PTPRA-202ENST00000318266 SFXN2Q96NB2 322 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 GSDMCQ9BYG8 508 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 OR51I1Q9H343 314 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 AUNIPQ9H7T9 357 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
PTPRA-202ENST00000318266 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 A0A1W2PRQ8 180 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CHURC1-FNTBB4DL54 471 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF593O00488 134 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 EFCAB14O75071 495 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 DUSP11O75319 330 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 PRKRAO75569 313 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SLCO2B1O94956 709 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 PLATP00750 562 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SERPIND1P05546 499 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 HBMQ6B0K9 141 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 HIST2H2AA3Q6FI13 130 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SFXN4Q6P4A7 337 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OAFQ86UD1 273 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CPOQ8IVL8 374 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RASGEF1AQ8N9B8 481 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MORN4Q8NDC4 146 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OR4Q3Q8NH05 313 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OR56A3Q8NH54 315 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 GANCQ8TET4 914 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 NEURL3Q96EH8 262 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 FOPNLQ96NB1 174 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ERMAPQ96PL5 475 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OR2M2Q96R28 347 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OR10A4Q9H209 315 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 C11orf49Q9H6J7 331 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MRPL39Q9NYK5 338 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 H2AFY2Q9P0M6 372 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 KLHL42Q9P2K6 505 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 NUBP2Q9Y5Y2 271 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 E9PI62 339 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 TMEM189-UBE2V1I3L0A0 370 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RNF13O43567 381 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 HYAL3O43820 417 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MMP20O60882 483 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 REM1O75628 298 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RGS9O75916 674 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SOX30O94993 753 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 WNT1P04628 370 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RB1P06400 928 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 C1GALT1C1LP0DN25 315 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ARHGDIBP52566 201 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF33BQ06732 778 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RIN1Q13671 783 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 TCTE1Q5JU00 501 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 TMEM220Q6QAJ8 160 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ZNF322Q6U7Q0 402 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 Q6ZTK2 550 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 NLRC3Q7RTR2 1065 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CFAP206Q8IYR0 622 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CMTM8Q8IZV2 173 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 TBC1D19Q8N5T2 526 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OR10H4Q8NGA5 316 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MOSPD2Q8NHP6 518 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RPLP0P6Q8NHW5 317 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 FGF11Q92914 225 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 FUZQ9BT04 418 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 BRD7Q9NPI1 651 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 EQTNQ9NQ60 294 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 PLXND1Q9Y4D7 1925 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MEIKINA0A087WXM9 373 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 KHNYNO15037 678 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 NPC1O15118 1278 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CHST10O43529 356 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 EPPINO95925 133 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MAPK9P45984 424 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 VEGFCP49767 419 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 RNF144AP50876 292 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SNRPD1P62314 119 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SIM1P81133 766 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 EFNB1P98172 346 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OC90Q02509 493 aaPredicted RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SNTB2Q13425 540 aaKnown RBP9.05□□□□□ -0.96
PTPRA-202ENST00000318266 OPCMLQ14982 345 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 DUSP6Q16828 381 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CCNJQ5T5M9 372 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 C1orf94Q6P1W5 598 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 PLBD1Q6P4A8 553 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 C17orf107Q6ZR85 190 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CEACAM19Q7Z692 300 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 STPG2Q8N412 459 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 SMPDL3AQ92484 453 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 ZG16BQ96DA0 208 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 CHFRQ96EP1 664 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 BTBD1Q9H0C5 482 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 MTG2Q9H4K7 406 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 A4GALTQ9NPC4 353 aa9.05□□□□□ -0.96
PTPRA-202ENST00000318266 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms