RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 BCKDHBP21953 392 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 UQCRC2P22695 453 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 AQP1P29972 269 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 PER3P56645 1201 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 RPS15AP62244 130 aaKnown RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SYT16Q17RD7 645 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF750Q32MQ0 723 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SAXO2Q658L1 398 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 C18orf63Q68DL7 685 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 FRMPD2BQ6IN97 320 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 EIF3MQ7L2H7 374 aaKnown RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 TSEN54Q7Z6J9 526 aaKnown RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 C1orf210Q8IVY1 113 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 NT5CQ8TCD5 201 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 MARC2Q969Z3 335 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CLDN23Q96B33 292 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SLC22A18Q96BI1 424 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 KCNC2Q96PR1 638 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 SAMD4AQ9UPU9 718 aaKnown RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 CORO2BQ9UQ03 480 aa12.23□□□□□ -0.45
CPNE1-201ENST00000317677 ZFHX2Q9C0A1 2572 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-201ENST00000317677 TMEM131Q92545 1883 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 LOC105369274A0A096LPK9 316 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 A0A0B4J293 547 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 KIR2DS5A0A0G2JLQ3 304 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 A0A0G2JNG1 304 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 LOC102723532A0A0G2JNH3 316 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 LINC00854A0A1B0GVQ3 168 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 A0A1W2PRG6 482 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 E9PQ18 207 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 KIR2DS3K7RE56 304 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 TSPAN4O14817 238 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 AIFM1O95831 613 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 SMIM10L1P0DMW3 83 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 CTSEP14091 401 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 GSTM5P46439 218 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 RPS26P62854 115 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 VLDLRP98155 873 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 HSPB3Q12988 150 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 KIR2DS5Q14953 304 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 AANATQ16613 207 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 TIGD6Q17RP2 521 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 GCNT6Q5T4J0 391 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 TYW3Q6IPR3 259 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 C19orf48Q6RUI8 117 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 ASPGQ86U10 573 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 OR4N4Q8N0Y3 316 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 GDPD1Q8N9F7 314 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 FAM46DQ8NEK8 389 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 NFKBIDQ8NI38 313 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 C1orf216Q8TAB5 229 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 UTP15Q8TED0 518 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 ZDHHC1Q8WTX9 485 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 RSC1A1Q92681 617 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 RNF31Q96EP0 1072 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 SMIM10Q96HG1 83 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 HSH2DQ96JZ2 352 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 SECISBP2Q96T21 854 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 RSPO3Q9BXY4 272 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 MMP28Q9H239 520 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 GLIPR2Q9H4G4 154 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 GMEB2Q9UKD1 530 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 FBXW2Q9UKT8 454 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 CES1P1Q9UKY3 287 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
CPNE1-201ENST00000317677 HSPB11Q9Y547 144 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 U3KQ87 197 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 V9GYH0 126 aa12.22□□□□□ -0.45
CPNE1-201ENST00000317677 B4DGG1 531 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 PROB1E7EW31 1015 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 HCRTR1O43613 425 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 PPM1BO75688 479 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 DRD2P14416 443 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 CD38P28907 300 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 CHI3L1P36222 383 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 NBL1P41271 181 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 ARFIP1P53367 373 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 MANFP55145 182 aaKnown RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 MAZP56270 477 aaKnown RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 OLR1P78380 273 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 DMWDQ09019 674 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 ZNF267Q14586 743 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-201ENST00000317677 SLC9A5Q14940 896 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 TAB1Q15750 504 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 GRK1Q15835 563 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 ZDHHC21Q8IVQ6 265 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 SPEM1Q8N4L4 309 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 TBC1D19Q8N5T2 526 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 HORMAD2Q8N7B1 307 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 SUN3Q8TAQ9 357 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 GAL3ST3Q96A11 431 aa12.21□□□□□ -0.45
CPNE1-201ENST00000317677 DACT3Q96B18 629 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms