RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DPP4P27487 766 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 CALRP27797 417 aaKnown RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 HTR1FP30939 366 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 FEN1P39748 380 aaKnown RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MTNR1BP49286 362 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PCYT1AP49585 367 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 STARD3Q14849 445 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ISXQ2M1V0 245 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PRICKLE4Q2TBC4 344 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 THSD4Q6ZMP0 1018 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 NATD1Q8N6N6 113 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF555Q8NEP9 628 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 RORBQ92753 470 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 SLC25A28Q96A46 364 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ANKRD9Q96BM1 317 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PINK1Q9BXM7 581 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 KIR3DX1Q9H7L2 352 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 MCCC2Q9HCC0 563 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 PRSS16Q9NQE7 514 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ATAD3AQ9NVI7 634 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 WWOXQ9NZC7 414 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 SEMA5BQ9P283 1151 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 SATB2Q9UPW6 733 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ATG4BQ9Y4P1 393 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ATG2BQ96BY7 2078 aa7.26□□□□□ -1.25
CNOT4-201ENST00000315544 ARHGEF17Q96PE2 2063 aaPredicted RBP7.26□□□□□ -1.25
CNOT4-201ENST00000315544 hCG_2014768A0A024R1R8 64 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 MEIOCA2RUB1 952 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 FAM172BPA6NC97 362 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ISM1B1AKI9 464 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 NEDD8-MDP1E9PL57 170 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 DLL1O00548 723 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 P2RX6O15547 441 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PRKRAO75569 313 aaKnown RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 OR2A4O95047 310 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ASGR2P07307 311 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 C6P13671 934 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 RPS15P62841 145 aaKnown RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TMED1Q13445 227 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 MFSD13AQ14CX5 517 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF284Q2VY69 593 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TMEM31Q5JXX7 168 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 GCNT6Q5T4J0 391 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 GARNL3Q5VVW2 1013 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 MED27Q6P2C8 311 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 NIPAL3Q6P499 406 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF322Q6U7Q0 402 aaPredicted RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF438Q7Z4V0 828 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 OR11G2Q8NGC1 345 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 OR8J1Q8NGP2 316 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 DNASE2BQ8WZ79 361 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 YIPF5Q969M3 257 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 FAM162AQ96A26 154 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 OR2A7Q96R45 310 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 FANCFQ9NPI8 374 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 RXFP3Q9NSD7 469 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 C2orf42Q9NWW7 574 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SIGLEC7Q9Y286 467 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TRBC2A0A5B9 178 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 GALR3O60755 368 aaPredicted RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 C1QBP02746 253 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 THBS1P07996 1170 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ACP5P13686 325 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SERPINB1P30740 379 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 EVI2BP34910 448 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 NUDT6P53370 316 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 MAPK12P53778 367 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 CDK3Q00526 305 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TP53BP2Q13625 1128 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 DHCR24Q15392 516 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SPHARQ15513 63 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TMEM44Q2T9K0 475 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PAGE2Q7Z2X7 111 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PAQR4Q8N4S7 273 aaPredicted RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 OR52P1PQ8NH57 321 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ELP4Q96EB1 424 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PEX11GQ96HA9 241 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 TMEM80Q96HE8 168 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 FYTTD1Q96QD9 318 aaKnown RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ABHD1Q96SE0 405 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 LMF2Q9BU23 707 aaKnown RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 EGLN3Q9H6Z9 239 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SGK2Q9HBY8 427 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 RASSF1Q9NS23 344 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 DLL3Q9NYJ7 618 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF292O60281 2723 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 A6NL46 340 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 FOXI3A8MTJ6 420 aaPredicted RBP7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PTGES3LE9PB15 166 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ADRB1P08588 477 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 ZNF883P0CG24 379 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SULT1A3P0DMM9 295 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SULT1A4P0DMN0 295 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SOX11P35716 441 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 RAG2P55895 527 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 CAMK2DQ13557 499 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 PCK2Q16822 640 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 SLC36A1Q7Z2H8 476 aa7.25□□□□□ -1.25
CNOT4-201ENST00000315544 HDDC3Q8N4P3 179 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms