RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 A0A0G2JND7 137 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 H0YC42 278 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 RNASET2O00584 256 aaKnown RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 TP53I11O14683 189 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLC22A3O75751 556 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SNUPNO95149 360 aaKnown RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CLDN1O95832 211 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 OR12D1P0DN82 309 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ABOP16442 354 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 EVI2BP34910 448 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 TPD52P55327 224 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ADORA2A-AS1P86434 159 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 TIGD3Q6B0B8 471 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CDC73Q6P1J9 531 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLC22A16Q86VW1 577 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 LRRC34Q8IZ02 419 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 GHDCQ8N2G8 530 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CDRT4Q8N9R6 151 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 DUSP19Q8WTR2 217 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ERP27Q96DN0 273 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CCDC120Q96HB5 630 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PRPF18Q99633 342 aaKnown RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 OR51I1Q9H343 314 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 RABEP2Q9H5N1 569 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 C3orf14Q9HBI5 128 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLC52A3Q9NQ40 469 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ATAD3AQ9NVI7 634 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PRSS51A0A1B0GVH4 220 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ANKRD33BA6NCL7 494 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLCO1B7G3V0H7 640 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 IL33O95760 270 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 OPN1LWP04000 364 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CAPN3P20807 821 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PTGS2P35354 604 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 TMED10P49755 219 aaKnown RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PNLIPRP2P54317 469 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLC10A1Q14973 349 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 VPS26BQ4G0F5 336 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 GXYLT1Q4G148 440 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 PAGE3Q5JUK9 113 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF621Q6ZSS3 439 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 COX18Q8N8Q8 333 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 FAM83FQ8NEG4 500 aaPredicted RBP10.97□□□□□ -0.65
SCFD1-201ENST00000311943 OR1J4Q8NGS1 313 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 FAM110BQ8TC76 370 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 SLC35A5Q9BS91 424 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 LDAHQ9H6V9 325 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 C15orf41Q9Y2V0 281 aa10.97□□□□□ -0.65
SCFD1-201ENST00000311943 CLDN24A6NM45 220 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 SNPHO15079 494 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 POLR3GO15318 223 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-201ENST00000311943 OXSR1O95747 527 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-201ENST00000311943 ALOX5P09917 674 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 NAGAP17050 411 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 MATN1P21941 496 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 CA7P43166 264 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 PRR5P85299 388 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 DECR1Q16698 335 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 HYAL4Q2M3T9 481 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 CYP27C1Q4G0S4 372 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 PDCD4Q53EL6 469 aaKnown RBP10.96□□□□□ -0.65
SCFD1-201ENST00000311943 RTL6Q6ICC9 239 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF585AQ6P3V2 769 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 CBLN3Q6UW01 205 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 PACS2Q86VP3 889 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 RNF130Q86XS8 419 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 RNF138Q8WVD3 245 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 SH3YL1Q96HL8 342 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-201ENST00000311943 PANX1Q96RD7 426 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 DSN1Q9H410 356 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 EXO5Q9H790 373 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 MKLN1Q9UL63 735 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 BOKQ9UMX3 212 aaPredicted RBP10.96□□□□□ -0.65
SCFD1-201ENST00000311943 SLC5A6Q9Y289 635 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 WIF1Q9Y5W5 379 aa10.96□□□□□ -0.65
SCFD1-201ENST00000311943 TRGV5A0A0B4J1U4 118 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 CCDC154A6NI56 674 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 ACOT7O00154 380 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 IGHG3P01860 377 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 NUDT7P0C024 238 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 IDO1P14902 403 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 NCF2P19878 526 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-201ENST00000311943 KRT20P35900 424 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 RPL3P39023 403 aaKnown RBP10.96□□□□□ -0.66
SCFD1-201ENST00000311943 POLR2JP52435 117 aaKnown RBP10.96□□□□□ -0.66
SCFD1-201ENST00000311943 MVDP53602 400 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 SEC24CP53992 1094 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 ZNHIT3Q15649 155 aaPredicted RBP10.96□□□□□ -0.66
SCFD1-201ENST00000311943 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 KRTCAP3Q53RY4 240 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 DCST2Q5T1A1 773 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 ARSKQ6UWY0 536 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 RGS9BPQ6ZS82 235 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 TMEM41AQ96HV5 264 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 PSMG3-AS1Q96PY0 264 aa10.96□□□□□ -0.66
SCFD1-201ENST00000311943 TMEM120AQ9BXJ8 343 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms