RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GSTT1P30711 240 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 GLP1RP43220 463 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 GRIK2Q13002 908 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 ZMYND11Q15326 602 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 SIRT6Q8N6T7 355 aa10.08□□□□□ -0.8
SYNPO2-201ENST00000307142 PLRG1O43660 514 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 APOL3O95236 402 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 PPP1R3DO95685 299 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 GPR75O95800 540 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CYB561P49447 251 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 HTR6P50406 440 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 PLGLAQ15195 96 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 EXT1Q16394 746 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TRNP1Q6NT89 227 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 WBP2Q969T9 261 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC5A7Q9GZV3 580 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 GPR160Q9UJ42 338 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MGAT4AQ9UM21 535 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 DNAJC15Q9Y5T4 150 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TMEM202A6NGA9 273 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TYROBPO43914 113 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 RAD51DO75771 328 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TNFRSF1BP20333 461 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ADRA1AP35348 466 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MPLP40238 635 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ADARP55265 1226 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ADAM17P78536 824 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 BNIP3Q12983 259 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SIX1Q15475 284 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 NDUFA5Q16718 116 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SWI5Q1ZZU3 235 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 RFPL3O75679 317 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 RPS5P46782 204 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 POU3F4P49335 361 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TNFRSF17Q02223 184 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ULK3Q6PHR2 472 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SHQ1Q6PI26 577 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MMP21Q8N119 569 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 OSBPL7Q9BZF2 842 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 USP36Q9P275 1121 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TBC1D29Q9UFV1 150 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ARL6IP5O75915 188 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MYF5P13349 255 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 DCAF7P61962 342 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC22A16Q86VW1 577 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF597Q96LX8 424 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CCDC74BQ96LY2 380 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 LIN28AQ9H9Z2 209 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 KLHL42Q9P2K6 505 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TMEM14AQ9Y6G1 99 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MRPL33O75394 65 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CNR2P34972 360 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TRA2BP62995 288 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 APOFQ13790 326 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 LACTB2Q53H82 288 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 AGAP7PQ5VUJ5 663 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 PAPD4Q6PIY7 484 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 NAGSQ8N159 534 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 UCN3Q969E3 161 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 AGAP4Q96P64 663 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SCGB3A2Q96PL1 93 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CALHM2Q9HA72 323 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 UBQLN4Q9NRR5 601 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 EXOSC1Q9Y3B2 195 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ANTXRLA6NF34 631 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CSO75390 466 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ETS2P15036 469 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MAOAP21397 527 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 IDUAP35475 653 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 DCTP40126 519 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 RSU1Q15404 277 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CYS1Q717R9 158 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 OR1N1Q8NGS0 311 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 TSPEARQ8WU66 669 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 CNN2Q99439 309 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 PKP2Q99959 881 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MKRN2Q9H000 416 aaKnown RBP10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF160Q9HCG1 818 aa10.07□□□□□ -0.8
SYNPO2-201ENST00000307142 MROH6A6NGR9 719 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 RNASET2O00584 256 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 TNFRSF10CO14798 259 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 AIFM1O95831 613 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 CEBPGP53567 150 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PRPS1P60891 318 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 MPP2Q14168 576 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF829Q3KNS6 432 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 CCNJQ5T5M9 372 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 LRRC18Q8N456 261 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PATE1Q8WXA2 126 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF775Q96BV0 537 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 OR7D2Q96RA2 312 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ACPTQ9BZG2 426 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms