RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 M0R233 179 aa15.04■□□□□ -0
USP42-201ENST00000306177 KIAA0355O15063 1070 aa15.04■□□□□ -0
USP42-201ENST00000306177 CFL1P23528 166 aaKnown RBP15.04■□□□□ -0
USP42-201ENST00000306177 WNT4P56705 351 aa15.04■□□□□ -0
USP42-201ENST00000306177 MAP4K2Q12851 820 aa15.04■□□□□ -0
USP42-201ENST00000306177 BCL2L15Q5TBC7 163 aa15.04■□□□□ -0
USP42-201ENST00000306177 CPOQ8IVL8 374 aa15.04■□□□□ -0
USP42-201ENST00000306177 OR2A12Q8NGT7 310 aa15.04■□□□□ -0
USP42-201ENST00000306177 HHIPQ96QV1 700 aa15.04■□□□□ -0
USP42-201ENST00000306177 SLC22A12Q96S37 553 aa15.04■□□□□ -0
USP42-201ENST00000306177 LAMA4Q16363 1823 aa15.04■□□□□ -0
USP42-201ENST00000306177 GJE1A6NN92 205 aa15.04■□□□□ -0
USP42-201ENST00000306177 E2F3O00716 465 aa15.04■□□□□ -0
USP42-201ENST00000306177 ITGBL1O95965 494 aaPredicted RBP15.04■□□□□ -0
USP42-201ENST00000306177 H2AFB2P0C5Z0 115 aa15.04■□□□□ -0
USP42-201ENST00000306177 HIST1H1TP22492 207 aaPredicted RBP15.04■□□□□ -0
USP42-201ENST00000306177 CDK10Q15131 360 aa15.04■□□□□ -0
USP42-201ENST00000306177 BTBD16Q32M84 506 aa15.04■□□□□ -0
USP42-201ENST00000306177 ERVK13-1Q9NX77 482 aa15.04■□□□□ -0
USP42-201ENST00000306177 PCDH10Q9P2E7 1040 aa15.04■□□□□ -0
USP42-201ENST00000306177 GJA4P35212 333 aa15.03■□□□□ -0
USP42-201ENST00000306177 TNFRSF4P43489 277 aa15.03■□□□□ -0
USP42-201ENST00000306177 BMXP51813 675 aa15.03■□□□□ -0
USP42-201ENST00000306177 CTBSQ01459 385 aa15.03■□□□□ -0
USP42-201ENST00000306177 RAB11BQ15907 218 aa15.03■□□□□ -0
USP42-201ENST00000306177 CDNFQ49AH0 187 aa15.03■□□□□ -0
USP42-201ENST00000306177 SLC6A7Q99884 636 aa15.03■□□□□ -0
USP42-201ENST00000306177 OR10A4Q9H209 315 aa15.03■□□□□ -0
USP42-201ENST00000306177 NAALAD2Q9Y3Q0 740 aa15.03■□□□□ -0
USP42-201ENST00000306177 C17orf113A0A1B0GUU1 675 aa15.03■□□□□ -0
USP42-201ENST00000306177 A8MV72 311 aaPredicted RBP15.03■□□□□ -0
USP42-201ENST00000306177 A8MVJ9 347 aa15.03■□□□□ -0
USP42-201ENST00000306177 ZNF43P17038 809 aa15.03■□□□□ -0
USP42-201ENST00000306177 LSAMPQ13449 338 aa15.03■□□□□ -0
USP42-201ENST00000306177 DCST2Q5T1A1 773 aa15.03■□□□□ -0
USP42-201ENST00000306177 GPR149Q86SP6 731 aa15.03■□□□□ -0
USP42-201ENST00000306177 CLEC14AQ86T13 490 aa15.03■□□□□ -0
USP42-201ENST00000306177 EGFL6Q8IUX8 553 aa15.03■□□□□ -0
USP42-201ENST00000306177 MCATQ8IVS2 390 aaKnown RBP15.03■□□□□ -0
USP42-201ENST00000306177 DTX3Q8N9I9 347 aa15.03■□□□□ -0
USP42-201ENST00000306177 OR5AK2Q8NH90 309 aa15.03■□□□□ -0
USP42-201ENST00000306177 SNIP1Q8TAD8 396 aaKnown RBP15.03■□□□□ -0
USP42-201ENST00000306177 MACROD1Q9BQ69 325 aa15.03■□□□□ -0
USP42-201ENST00000306177 GABBR2O75899 941 aa15.03■□□□□ -0
USP42-201ENST00000306177 F11P03951 625 aa15.03■□□□□ -0
USP42-201ENST00000306177 GNAO1P09471 354 aa15.03■□□□□ -0
USP42-201ENST00000306177 MAGEA3P43357 314 aa15.03■□□□□ -0
USP42-201ENST00000306177 MAGEA12P43365 314 aa15.03■□□□□ -0
USP42-201ENST00000306177 ZNF81P51508 661 aa15.03■□□□□ -0
USP42-201ENST00000306177 NKX3-2P78367 333 aa15.03■□□□□ -0
USP42-201ENST00000306177 ATXN7L3Q14CW9 347 aaPredicted RBP15.03■□□□□ -0
USP42-201ENST00000306177 GGTA1PQ4G0N0 100 aa15.03■□□□□ -0
USP42-201ENST00000306177 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
USP42-201ENST00000306177 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -02e-6■□□□□ 8.4
USP42-201ENST00000306177 CRB3Q9BUF7 120 aa15.03■□□□□ -0
USP42-201ENST00000306177 ENY2Q9NPA8 101 aa15.03■□□□□ -0
USP42-201ENST00000306177 MLXQ9UH92 298 aa15.03■□□□□ -0
USP42-201ENST00000306177 MAB21L2Q9Y586 359 aa15.03■□□□□ -0
USP42-201ENST00000306177 C12orf71A8MTZ7 269 aa15.03■□□□□ -0
USP42-201ENST00000306177 KLKB1P03952 638 aa15.03■□□□□ -0
USP42-201ENST00000306177 FOSL2P15408 326 aa15.03■□□□□ -0
USP42-201ENST00000306177 LHCGRP22888 699 aa15.03■□□□□ -0
USP42-201ENST00000306177 NFATC4Q14934 902 aa15.03■□□□□ -0
USP42-201ENST00000306177 GDPGP1Q6ZNW5 385 aa15.03■□□□□ -0
USP42-201ENST00000306177 GAREM2Q75VX8 874 aa15.03■□□□□ -0
USP42-201ENST00000306177 GTF2H4Q92759 462 aa15.03■□□□□ -0
USP42-201ENST00000306177 CDS1Q92903 461 aa15.03■□□□□ -0
USP42-201ENST00000306177 ZNF597Q96LX8 424 aa15.03■□□□□ -0
USP42-201ENST00000306177 CPNE7Q9UBL6 633 aa15.03■□□□□ -0
USP42-201ENST00000306177 FOXD2O60548 495 aaPredicted RBP15.02■□□□□ -0
USP42-201ENST00000306177 ALDOCP09972 364 aaKnown RBP15.02■□□□□ -0
USP42-201ENST00000306177 AMY2BP19961 511 aa15.02■□□□□ -0
USP42-201ENST00000306177 TDGQ13569 410 aa15.02■□□□□ -0
USP42-201ENST00000306177 FAM76BQ5HYJ3 339 aa15.02■□□□□ -0
USP42-201ENST00000306177 CCBE1Q6UXH8 406 aaPredicted RBP15.02■□□□□ -0
USP42-201ENST00000306177 CBLL1Q75N03 491 aa15.02■□□□□ -0
USP42-201ENST00000306177 SLC35F2Q8IXU6 374 aa15.02■□□□□ -0
USP42-201ENST00000306177 TFAP2CQ92754 450 aa15.02■□□□□ -0
USP42-201ENST00000306177 TRIM43Q96BQ3 446 aaPredicted RBP15.02■□□□□ -0
USP42-201ENST00000306177 MEPEQ9NQ76 525 aaPredicted RBP15.02■□□□□ -0
USP42-201ENST00000306177 STARD5Q9NSY2 213 aa15.02■□□□□ -0
USP42-201ENST00000306177 SRPK3Q9UPE1 567 aa15.02■□□□□ -0
USP42-201ENST00000306177 SLC9B1P1A6NJY1 282 aa15.02■□□□□ -0
USP42-201ENST00000306177 FRS3O43559 492 aa15.02■□□□□ -0
USP42-201ENST00000306177 RP2O75695 350 aa15.02■□□□□ -0
USP42-201ENST00000306177 ATE1O95260 518 aa15.02■□□□□ -0
USP42-201ENST00000306177 LCKP06239 509 aa15.02■□□□□ -0
USP42-201ENST00000306177 UBL4AP11441 157 aa15.02■□□□□ -0
USP42-201ENST00000306177 RBMS1P29558 406 aaKnown RBP15.02■□□□□ -0
USP42-201ENST00000306177 PPP5CP53041 499 aa15.02■□□□□ -0
USP42-201ENST00000306177 TLE3Q04726 772 aa15.02■□□□□ -0
USP42-201ENST00000306177 NTRK2Q16620 822 aa15.02■□□□□ -0
USP42-201ENST00000306177 UNQ6126/PRO20091Q6UXV3 157 aa15.02■□□□□ -0
USP42-201ENST00000306177 MFSD6LQ8IWD5 586 aa15.02■□□□□ -0
USP42-201ENST00000306177 FNDC8Q8TC99 324 aa15.02■□□□□ -0
USP42-201ENST00000306177 ALG8Q9BVK2 526 aa15.02■□□□□ -0
USP42-201ENST00000306177 RANBP3Q9H6Z4 567 aaPredicted RBP15.02■□□□□ -0
USP42-201ENST00000306177 PARPBPQ9NWS1 579 aa15.02■□□□□ -0
USP42-201ENST00000306177 I3L521 148 aa15.02□□□□□ -0.01
USP42-201ENST00000306177 BRINP1O60477 761 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms