RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RMND5BQ96G75 393 aaPredicted RBP24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 TRIB1Q96RU8 372 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 CALHM2Q9HA72 323 aa24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 NOP53Q9NZM5 478 aaKnown RBP24.02■■□□□ 1.44
CDKN2A-201ENST00000304494 GXYLT2A0PJZ3 443 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 LAMP1P11279 417 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 CEACAM8P31997 349 aaPredicted RBP24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 PRIM2P49643 509 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 RPL14P50914 215 aaKnown RBP24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 MPP2Q14168 576 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 GANABQ14697 944 aaKnown RBP24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 MFSD12Q6NUT3 480 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 TRIM42Q8IWZ5 723 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 FADS6Q8N9I5 356 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 OR5P2Q8WZ92 322 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 COQ8BQ96D53 544 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 SFXN2Q96NB2 322 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 TBL1XR1Q9BZK7 514 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 ZNF395Q9H8N7 513 aaPredicted RBP24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 SLC24A3Q9HC58 644 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 ZCCHC3Q9NUD5 404 aaKnown RBP24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 ASIC5Q9NY37 505 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 FLRT3Q9NZU0 649 aa24.01■■□□□ 1.43
CDKN2A-201ENST00000304494 H0Y3Z8 333 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 DVL2O14641 736 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 UTS2O95399 124 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 ALOX5P09917 674 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 FREM3P0C091 2139 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 G6PDP11413 515 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 EFNA1P20827 205 aaPredicted RBP24■■□□□ 1.43
CDKN2A-201ENST00000304494 BGNP21810 368 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 CHMP24386 653 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 STX3Q13277 289 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 LSM12Q3MHD2 195 aaKnown RBP24■■□□□ 1.43
CDKN2A-201ENST00000304494 TNIP2Q8NFZ5 429 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 OR2M3Q8NG83 312 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 ZBTB9Q96C00 473 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 FAM120BQ96EK7 910 aaKnown RBP24■■□□□ 1.43
CDKN2A-201ENST00000304494 PAIP2Q9BPZ3 127 aaKnown RBP24■■□□□ 1.43
CDKN2A-201ENST00000304494 C20orf27Q9GZN8 174 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 DSN1Q9H410 356 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 PTGES2Q9H7Z7 377 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 HHATLQ9HCP6 504 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 SIRT3Q9NTG7 399 aaPredicted RBP24■■□□□ 1.43
CDKN2A-201ENST00000304494 SNX8Q9Y5X2 465 aa24■■□□□ 1.43
CDKN2A-201ENST00000304494 ACP2P11117 423 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 C21orf58P58505 322 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 STX5Q13190 355 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 HHATQ5VTY9 493 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 RIMKLAQ8IXN7 391 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 DMRTC2Q8IXT2 367 aaPredicted RBP23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 KRTCAP2Q8N6L1 136 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 SLC16A11Q8NCK7 471 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 PSMA8Q8TAA3 256 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 SORT1Q99523 831 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 BHLHE41Q9C0J9 482 aaPredicted RBP23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 NEUROD4Q9HD90 331 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 ZNF629Q9UEG4 869 aaPredicted RBP23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 HAO1Q9UJM8 370 aa23.99■■□□□ 1.43
CDKN2A-201ENST00000304494 MBD3L4A6NDZ8 208 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 MBD3L3A6NE82 208 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 MBD3L5A6NJ08 208 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 KDM4EB2RXH2 506 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 ZIC3O60481 467 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 IGKV1D-16P01601 117 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 LCN1P31025 176 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 WNT3P56703 355 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 CLDN8P56748 225 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 C17orf67Q0P5P2 114 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 DUSP5Q16690 384 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 MARCH3Q86UD3 253 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 ANKRD42Q8N9B4 389 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 NAXEQ8NCW5 288 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 MBD3L2Q8NHZ7 208 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 FBXO30Q8TB52 745 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 DUSP19Q8WTR2 217 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 JADE3Q92613 823 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 LRRC46Q96FV0 321 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 PPP1R36Q96LQ0 422 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 AKTIPQ9H8T0 292 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 RPH3AQ9Y2J0 694 aaPredicted RBP23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 FBN2P35556 2912 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 ARHGAP21Q5T5U3 1957 aa23.98■■□□□ 1.43
CDKN2A-201ENST00000304494 APCP25054 2843 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 B4DXG7 233 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 KCNK2O95069 426 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 HMGN2P05204 90 aaKnown RBP23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 NGFRP08138 427 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 BMP5P22003 454 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 LHX2P50458 406 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 LRBAP50851 2863 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 DIO3P55073 304 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 SRYQ05066 204 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 GRAMD1BQ3KR37 738 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 CAMKMTQ7Z624 323 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 LRRC34Q8IZ02 419 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 COX18Q8N8Q8 333 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 OR56A1Q8NGH5 318 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 FAM110BQ8TC76 370 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms