RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PNPOQ9NVS9 261 aa10.22□□□□□ -0.77
CLCC1-201ENST00000302500 FAM120CQ9NX05 1096 aaKnown RBP10.22□□□□□ -0.77
CLCC1-201ENST00000302500 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
CLCC1-201ENST00000302500 MAPRE3Q9UPY8 281 aa10.22□□□□□ -0.77
CLCC1-201ENST00000302500 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
CLCC1-201ENST00000302500 CD8B2A6NJW9 211 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 TTC36A6NLP5 189 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 FIGNL2A6NMB9 653 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ALG1L2C9J202 215 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 HNRNPRO43390 633 aaKnown RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 HCRTR2O43614 444 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 REM1O75628 298 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 KCNK2O95069 426 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 HMGN2P05204 90 aaKnown RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 HOXD4P09016 255 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ESRRAP11474 423 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 H2AFXP16104 143 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ZNF708P17019 499 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 PRPS1L1P21108 318 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 SRD5A2P31213 254 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 TIMP3P35625 211 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 RPL14P50914 215 aaKnown RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ZNF136P52737 540 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 SMSP52788 366 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 DLX5P56178 289 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 RPP38P78345 283 aaKnown RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 PLAURQ03405 335 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ZNF155Q12901 538 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 CASP8Q14790 479 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 PDCD2Q16342 344 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 GRAMD1BQ3KR37 738 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 CROCCP2Q86T23 111 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 YRDCQ86U90 279 aaKnown RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 CDRT4Q8N9R6 151 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 NUP43Q8NFH3 380 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 TNIP2Q8NFZ5 429 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 OR4C3Q8NH37 302 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 OR5P2Q8WZ92 322 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 MARVELD3Q96A59 401 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 TESCQ96BS2 214 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 TMCO6Q96DC7 493 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 UCK2Q9BZX2 261 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 BHLHE41Q9C0J9 482 aaPredicted RBP10.21□□□□□ -0.78
CLCC1-201ENST00000302500 METTL7AQ9H8H3 244 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 PFDN4Q9NQP4 134 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 DUSP22Q9NRW4 184 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 JKAMPQ9P055 326 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 CLCF1Q9UBD9 225 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 KCNE3Q9Y6H6 103 aa10.21□□□□□ -0.78
CLCC1-201ENST00000302500 AHRRA9YTQ3 701 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 KLF11O14901 512 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 EMC8O43402 210 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 HSPA4LO95757 839 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 ACTL6AO96019 429 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 GABRA1P14867 456 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 IL12AP29459 219 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 GABRA3P34903 492 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 PTGER4P35408 488 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 MAGOHP61326 146 aaKnown RBP10.2□□□□□ -0.78
CLCC1-201ENST00000302500 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 FBXL19-AS1Q494R0 122 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 TTMPQ5BVD1 217 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLCC1-201ENST00000302500 WLSQ5T9L3 541 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 NSUN5P2Q63ZY6 315 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 TMEM211Q6ICI0 200 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 OR5M10Q6IEU7 315 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 ZNF585AQ6P3V2 769 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 ACAD11Q709F0 780 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 R3HCC1LQ7Z5L2 792 aaKnown RBP10.2□□□□□ -0.78
CLCC1-201ENST00000302500 CLECL1Q8IZS7 167 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 FNDC5Q8NAU1 212 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 ZPLD1Q8TCW7 415 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 RND1Q92730 232 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 TUBGCP3Q96CW5 907 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 JSRP1Q96MG2 331 aaPredicted RBP10.2□□□□□ -0.78
CLCC1-201ENST00000302500 STACQ99469 402 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 NUF2Q9BZD4 464 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 PIGUQ9H490 435 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 CHST11Q9NPF2 352 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 NOP53Q9NZM5 478 aaKnown RBP10.2□□□□□ -0.78
CLCC1-201ENST00000302500 KLRF1Q9NZS2 232 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 SH3BP4Q9P0V3 963 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 B4GALT7Q9UBV7 327 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 KCNE5Q9UJ90 142 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 GPR45Q9Y5Y3 372 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 ABCA4P78363 2273 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 HIVEP1P15822 2718 aa10.2□□□□□ -0.78
CLCC1-201ENST00000302500 A0A1W2PRB8 838 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 PRAMEF27A3QJZ7 478 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 FAM221AA4D161 298 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 NKX2-6A6NCS4 301 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 ETV2O00321 342 aaPredicted RBP10.19□□□□□ -0.78
CLCC1-201ENST00000302500 RNASET2O00584 256 aaKnown RBP10.19□□□□□ -0.78
CLCC1-201ENST00000302500 DNAJA2O60884 412 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 UTS2O95399 124 aa10.19□□□□□ -0.78
CLCC1-201ENST00000302500 OXSR1O95747 527 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms