RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 LIMS2Q7Z4I7 341 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 LDLRAD3Q86YD5 345 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 VRK3Q8IV63 474 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CFAP206Q8IYR0 622 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 THAP6Q8TBB0 222 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 RSPO3Q9BXY4 272 aaPredicted RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 DNTTIP1Q9H147 329 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 FARS2O95363 451 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 SELLP14151 372 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 PTGFRP43088 359 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 SLC6A11P48066 632 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CDH11P55287 796 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 SREBF2Q12772 1141 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZBTB2Q8N680 514 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 STK35Q8TDR2 534 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 RHOVQ96L33 236 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZNF75AQ96N20 296 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CCDC86Q9H6F5 360 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 BIN3Q9NQY0 253 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 VPS29Q9UBQ0 182 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 PURGQ9UJV8 347 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 NOD1Q9Y239 953 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZNF705EA8MWA4 302 aaPredicted RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 PGRMC2O15173 223 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 FPR3P25089 353 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ELAVL4P26378 380 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 SLC1A3P43003 542 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 GIPRP48546 466 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 PRKAG1P54619 331 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 SRSF11Q05519 484 aaKnown RBP13.54□□□□□ -0.24
CDT1-201ENST00000301019 RAB33AQ14088 237 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 PYHIN1Q6K0P9 492 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 NCEH1Q6PIU2 408 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 C17orf99Q6UX52 265 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 APOOLQ6UXV4 268 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ETV3LQ6ZN32 361 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CEACAM19Q7Z692 300 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 OR5M3Q8NGP4 307 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CHRDQ9H2X0 955 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 MTG2Q9H4K7 406 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ANGPT4Q9Y264 503 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 C5orf42Q9H799 3197 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 E7EQ34 232 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 E9PI62 339 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 KHDRBS3O75525 346 aaKnown RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 SOX30O94993 753 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 IRF1P10914 325 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 MMP11P24347 488 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 GDNFP39905 211 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 NSG1P42857 185 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 GK2Q14410 553 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 MANEAQ5SRI9 462 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 UMODL1-AS1Q8N2C9 162 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 SCLYQ96I15 445 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 OR51B5Q9H339 312 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 DDX31Q9H8H2 851 aaKnown RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 BTNL2Q9UIR0 455 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 AK6Q9Y3D8 172 aaKnown RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 PLXNB2O15031 1838 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 ANHXE9PGG2 379 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 SOCS6O14544 535 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 INSIG1O15503 277 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 CLDN7O95471 211 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 SNAI1O95863 264 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 HMGN1P05114 100 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 LIPCP11150 499 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 CD22P20273 847 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 MST1P26927 711 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 PTGER3P43115 390 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 PGBD2Q6P3X8 592 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 PODNL1Q6PEZ8 512 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 MON1AQ86VX9 555 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 ZNF433Q8N7K0 673 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 TEX47Q8TBZ9 253 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 NKX3-1Q99801 234 aaPredicted RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 SLC32A1Q9H598 525 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 TMEM185BQ9H7F4 350 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 SEC14L3Q9UDX4 400 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 FCF1Q9Y324 198 aaKnown RBP13.53□□□□□ -0.24
CDT1-201ENST00000301019 OARD1Q9Y530 152 aa13.53□□□□□ -0.24
CDT1-201ENST00000301019 E9PQ18 207 aa13.52□□□□□ -0.24
CDT1-201ENST00000301019 GOSR2O14653 212 aa13.52□□□□□ -0.24
CDT1-201ENST00000301019 OAZ2O95190 189 aa13.52□□□□□ -0.24
CDT1-201ENST00000301019 WDPCPO95876 746 aa13.52□□□□□ -0.24
CDT1-201ENST00000301019 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms