RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TMCO6Q96DC7 493 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 NECTIN4Q96NY8 510 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 RBCK1Q9BYM8 510 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 TNFP01375 233 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 TGM3Q08188 693 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 FAM46DQ8NEK8 389 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 OR4K5Q8NGD3 323 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 OR56A1Q8NGH5 318 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 RSC1A1Q92681 617 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 GIMAP5Q96F15 307 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CCDC32Q9BV29 185 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 C3orf14Q9HBI5 128 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CFL2Q9Y281 166 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CHST2Q9Y4C5 530 aa20.5■□□□□ 0.87
TPM4-201ENST00000300933 CENPVL1A0A0U1RR11 272 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 TNFRSF10CO14798 259 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 LGI1O95970 557 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 MMP11P24347 488 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 ETV6P41212 452 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 MAN2A2P49641 1150 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 MAP4K2Q12851 820 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 FBXO43Q4G163 708 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 BHLHB9Q6PI77 547 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 TMEM64Q6YI46 380 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 TDHQ8IZJ6 230 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 DEPDC4Q8N2C3 294 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 B4DGG1 531 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 OSMP13725 252 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 MAOBP27338 520 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 VSX2P58304 361 aaPredicted RBP20.49■□□□□ 0.87
TPM4-201ENST00000300933 TNFRSF17Q02223 184 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 CEP78Q5JTW2 689 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 LRRC25Q8N386 305 aaPredicted RBP20.49■□□□□ 0.87
TPM4-201ENST00000300933 TCEANCQ8N8B7 351 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 ADAMTS15Q8TE58 950 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 TM4SF19Q96DZ7 209 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 MGLLQ99685 303 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 SMURF1Q9HCE7 757 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 FAM60AQ9NP50 221 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 ADAP2Q9NPF8 381 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 TVP23BQ9NYZ1 205 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 PILRAQ9UKJ1 303 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 DAPP1Q9UN19 280 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 SLC9A8Q9Y2E8 581 aa20.49■□□□□ 0.87
TPM4-201ENST00000300933 CFAP54Q96N23 3096 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 MUC3AQ02505 3323 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 EFCAB10A6NFE3 127 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 ERVH48-1M5A8F1 160 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 TLR4O00206 839 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 SOX18P35713 384 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 LIMK1P53667 647 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 SUZ12Q15022 739 aaKnown RBP20.48■□□□□ 0.87
TPM4-201ENST00000300933 LAX1Q8IWV1 398 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 OR4K14Q8NGD5 310 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 PLCXD1Q9NUJ7 323 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 ZSCAN32Q9NX65 697 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 GRIP1Q9Y3R0 1128 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 FRYLO94915 3013 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 OR2W5A6NFC9 320 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 CTSEP14091 401 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 TRHRP34981 398 aaPredicted RBP20.48■□□□□ 0.87
TPM4-201ENST00000300933 GPLD1P80108 840 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 BBS10Q8TAM1 723 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 UBASH3BQ8TF42 649 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 RASSF5Q8WWW0 418 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 ZFYVE21Q9BQ24 234 aa20.48■□□□□ 0.87
TPM4-201ENST00000300933 LYARQ9NX58 379 aaKnown RBP20.48■□□□□ 0.87
TPM4-201ENST00000300933 NPIPA5A0A0B4J1W7 369 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 NPIPA7E9PJI5 369 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 FAAHO00519 579 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 B3GALT2O43825 422 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 GPX5O75715 221 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 ADAP00813 363 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 NPIPA8P0DM63 369 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 RPS19P39019 145 aaKnown RBP20.47■□□□□ 0.87
TPM4-201ENST00000300933 YPEL5P62699 121 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 SHC2P98077 582 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 FZD2Q14332 565 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 NOXA1Q86UR1 476 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 RERGQ96A58 199 aaPredicted RBP20.47■□□□□ 0.87
TPM4-201ENST00000300933 FKBP14Q9NWM8 211 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 FBXO34Q9NWN3 711 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 CNIH4Q9P003 139 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 CARD8Q9Y2G2 431 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 A0A1W2PQ09 198 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 PRAMEF26H0Y7S4 382 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 SGK494L7N484 410 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 CPNE3O75131 537 aaKnown RBP20.47■□□□□ 0.87
TPM4-201ENST00000300933 APOL3O95236 402 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 CSF2P04141 144 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 CKMT1AP12532 417 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 DBPQ10586 325 aaPredicted RBP20.47■□□□□ 0.87
TPM4-201ENST00000300933 SUN5Q8TC36 379 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 NT5CQ8TCD5 201 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 SFXN5Q8TD22 340 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 GPBAR1Q8TDU6 330 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 SLC6A18Q96N87 628 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 EGLN3Q9H6Z9 239 aa20.47■□□□□ 0.87
TPM4-201ENST00000300933 BCL2L10Q9HD36 194 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms